2e53

X-ray diffraction
2.4Å resolution

Crystal structure of basic winged bean lectin in complex with B blood group disaccharide

Released:

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-127671 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecules (6 distinct):
Basic agglutinin Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 241 amino acids
Theoretical weight: 26.51 KDa
Source organism: Psophocarpus tetragonolobus
UniProt:
  • Canonical: O24313 (Residues: 2-242; Coverage: 100%)
Gene name: WBAI
Sequence domains: Legume lectin domain
Structure domains: Jelly Rolls

Ligands and Environments

Carbohydrate polymer : NEW Components: NAG, BMA, FUC
Carbohydrate polymer : NEW Components: NAG, FUC
Carbohydrate polymer : NEW Components: NAG, FUC, NDG
Carbohydrate polymer : NEW Components: NAG
Carbohydrate polymer : NEW Components: GLA
2 bound ligands:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: RIGAKU RU300
Spacegroup: P21212
Unit cell:
a: 157.367Å b: 91.093Å c: 73.399Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.202 0.202 0.24