2dmq Summary


Solution structure of the homeobox domain of LIM/homeobox protein Lhx9

A publication describing this structure is not available. The depositing authors are Ohnishi, S.search; Tochio, N.search; Koshiba, S.search; Inoue, M.search; Kigawa, T.search; Yokoyama, S.search; RIKEN Structural Genomics/Proteomics Initiative (RSGI)search

The structure was determined using NMR spectroscopy and deposited in 2006.

The experimental data on which the structure is based was not deposited.

The PDB entry contains the structure of LIM/homeobox protein Lhx9. This molecule has the UniProt identifier Q9NQ69 (LHX9_HUMAN)search. The sample contained 80 residues which is < 90% of the natural sequence. Out of 80 residues 80 were observed and are deposited in the PDB.

The molecule is most likely monomeric.

The following tables show cross-reference information to other databases (to obtain a list of all PDB entries sharing the same property or classification, click on the magnifying glass icon):

Chain Name UniProt Name of source organism % of UniProt sequence present in the sample Residues in the sample molecules % of residues observed
A LIM/homeobox protein Lhx9 Q9NQ69 (268-334) (LHX9_HUMAN)search Homo sapienssearch < 90% 80 100%

This entry contains 1 unique UniProt protein:

UniProt accession Name Organism PDB
Q9NQ69 (268 - 334) LIM/homeobox protein Lhx9 Homo sapiens

Chain Structural classification (CATH) Sequence family (Pfam)
A Homeodomain-likesearch Homeobox domainsearch

Chain ID Biological process (GO) Molecular function (GO) Cellular component (GO)
A (Q9NQ69) regulation of transcription, DNA-templatedsearch sequence-specific DNA bindingsearch sequence-specific DNA binding transcription factor activitysearch DNA bindingsearch nucleussearch

Chain InterPro annotation
A Homeobox domainsearch Homeodomain-likesearch Homeobox, conserved sitesearch