› 2bdz

X-ray diffraction
2.1Å resolution

Mexicain from Jacaratia mexicana

Released:
DOI: 10.2210/pdb2bdz/pdb
PDB entry 2bdz coloured by chain, front view.
PDB entry 2bdz coloured by chain, side view.
PDB entry 2bdz coloured by chain, top view.
Source organism: Jacaratia mexicana
Entry authors: Gavira JA, Oliver-Salvador MC, Gonzalez-Ramirez LA, Soriano-Garcia M, Garcia-Ruiz JM

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-160883 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Mexicain Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 214 amino acids
Theoretical weight: 23.79 KDa
Source organism: Jacaratia mexicana
UniProt:
  • Canonical: P84346 (Residues: 1-214; Coverage: 100%)
Sequence domains: Papain family cysteine protease
Structure domains: Cysteine proteinases

Ligands and Environments

1 bound ligand:
Ligand E64 4 x E64
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: BRUKER
Spacegroup: P21
Unit cell:
a: 57.356Å b: 90.454Å c: 80.391Å
α: 90° β: 92.636° γ: 90°
R-values:
R R work R free
0.183 0.177 0.238

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