2lxc

Solution NMR

Solution structure of the complex between the Sgt2 homodimerization domain and the Get5 UBL domain

Released:

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
hetero trimer (preferred)
PDBe Complex ID:
PDB-CPX-171298 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Ubiquitin-like protein MDY2 Chain: A
Molecule details ›
Chain: A
Length: 81 amino acids
Theoretical weight: 9.17 KDa
Source organism: Saccharomyces cerevisiae S288C
Expression system: Escherichia coli
UniProt:
  • Canonical: Q12285 (Residues: 74-151; Coverage: 37%)
Gene names: GET5, MDY2, TMA24, YOL111C
Sequence domains: Ubiquitin family
Structure domains: Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1
Small glutamine-rich tetratricopeptide repeat-containing protein 2 Chains: B, C
Molecule details ›
Chains: B, C
Length: 74 amino acids
Theoretical weight: 7.89 KDa
Source organism: Saccharomyces cerevisiae S288C
Expression system: Escherichia coli
UniProt:
  • Canonical: Q12118 (Residues: 2-72; Coverage: 21%)
Gene names: SGT2, UNF346, YOR007C
Sequence domains: Homodimerisation domain of SGTA
Structure domains: Immunoglobulin FC, subunit C

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Chemical shift assignment: 60%
Refinement method: simulated annealing, experimentally driven docking
Expression system: Escherichia coli