› 2lvf

Solution NMR

Solution structure of the Brazil Nut 2S albumin Ber e 1

Released:
DOI: 10.2210/pdb2lvf/pdb
PDB entry 2lvf coloured by chain, ensemble of 12 models, front view.
PDB entry 2lvf coloured by chain, ensemble of 12 models, side view.
PDB entry 2lvf coloured by chain, ensemble of 12 models, top view.
Source organism: Bertholletia excelsa
Primary publication:
Solution structure, copper binding and backbone dynamics of recombinant Ber e 1-the major allergen from Brazil nut.
Rundqvist L, Tengel T, Zdunek J, Björn E, Schleucher J, Alcocer MJ, Larsson G
PLoS One 7 e46435 (2012)
PMID: 23056307

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-137624 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
2S sulfur-rich seed storage protein large chain 1B Chain: A
Molecule details ›
Chain: A
Length: 114 amino acids
Theoretical weight: 13.65 KDa
Source organism: Bertholletia excelsa
Expression system: Komagataella pastoris
UniProt:
  • Canonical: P04403 (Residues: 37-146; Coverage: 89%)
Gene name: BE2S1
Sequence domains: Protease inhibitor/seed storage/LTP family
Structure domains: Plant lipid-transfer and hydrophobic proteins

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Chemical shift assignment: 86%
Refinement method: simulated annealing, molecular dynamics
Expression system: Komagataella pastoris

Quick links

Citations

5 review citations

Do lipids influence the allergic sensitization process?
Bublin et al. (2014)
4 more

7 mentions without citation

Structure of allergens and structure based epitope predictions.
Dall'antonia et al. (2014)
6 more