› 2e8g

X-ray diffraction
1.7Å resolution

The structure of protein from P. horikoshii at 1.7 angstrom resolution

Released:
DOI: 10.2210/pdb2e8g/pdb
PDB entry 2e8g coloured by chain, front view.
PDB entry 2e8g coloured by chain, side view.
PDB entry 2e8g coloured by chain, top view.
Source organism: Pyrococcus horikoshii OT3
Primary publication:
Structure of protein PH0536 from Pyrococcus horikoshii at 1.7 A resolution reveals a novel assembly of an oligonucleotide/oligosaccharide-binding fold and an alpha-helical bundle.
Gao YG, Yao M, Tanaka I
Proteins 71 503-8 (2008)
PMID: 18186487

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-129699 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
tRNA-binding domain-containing protein Chains: A, B
Molecule details ›
Chains: A, B
Length: 241 amino acids
Theoretical weight: 26.96 KDa
Source organism: Pyrococcus horikoshii OT3
Expression system: Escherichia coli
UniProt:
  • Canonical: O58271 (Residues: 1-241; Coverage: 100%)
Gene name: PH0536
Sequence domains:
Structure domains:

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: PHOTON FACTORY BEAMLINE AR-NW12A, SPRING-8 BEAMLINE BL41XU
Spacegroup: P21
Unit cell:
a: 49.186Å b: 71.691Å c: 69.193Å
α: 90° β: 96.15° γ: 90°
R-values:
R R work R free
0.203 0.199 0.237
Expression system: Escherichia coli

Quick links

Citations

1 citations in other articles

Analyses of conditions for KMSSS loop in tyrosyl-tRNA synthetase by building a mutant library.
Kamijo et al. (2009)