› 2dk5

Solution NMR

Solution structure of Winged-Helix domain in RNA polymerase III 39KDa polypeptide

Released:
DOI: 10.2210/pdb2dk5/pdb
PDB entry 2dk5 coloured by chain, ensemble of 20 models, front view.
PDB entry 2dk5 coloured by chain, ensemble of 20 models, side view.
PDB entry 2dk5 coloured by chain, ensemble of 20 models, top view.
Source organism: Homo sapiens
Entry authors: He F, Muto Y, Inoue M, Kigawa T, Shirouzu M, Terada T, Yokoyama S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Function and Biology Details

Reaction catalysed: 
Nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1)
Biochemical function:
  • not assigned
Biological process:
Cellular component:
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-190513 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
DNA-directed RNA polymerase III subunit RPC6 Chain: A
Molecule details ›
Chain: A
Length: 91 amino acids
Theoretical weight: 9.87 KDa
Source organism: Homo sapiens
Expression system: Cell free synthesis
UniProt:
  • Canonical: Q9H1D9 (Residues: 78-155; Coverage: 25%)
Gene name: POLR3F
Structure domains: Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Refinement method: torsion angle dynamics
Expression system: Cell free synthesis

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