1z4v Summary


Parainfluenza Virus 5 (SV5) Hemagglutinin-Neuraminidase (HN) with ligand DANA (soaked with DANA, pH 7.0)

The structure was published by Yuan, P., Thompson, T.B., Wurzburg, B.A., Paterson, R.G., Lamb, R.A., and Jardetzky, T.S., in 2005 in a paper entitled "Structural studies of the parainfluenza virus 5 hemagglutinin-neuraminidase tetramer in complex with its receptor, sialyllactose." (abstract).

This crystal structure was determined using X-ray diffraction at a resolution of 2.3 Å and deposited in 2005.

The experimental data on which the structure is based was also deposited.

The PDB entry contains the structure of Hemagglutinin-neuraminidase. This molecule has the UniProt identifier P04850 (HN_SV5)search. The sample contained 532 residues which is 94% of the natural sequence. Out of 532 residues 444 were observed and are deposited in the PDB.

It also contains one or more heterogenic compounds (e.g., ligands, co-factors, ions, modified amino acids, etc.); see here for a complete list.

The molecule has more than one probable quaternary state observed. For more details see the quaternary structure page.

The following tables show cross-reference information to other databases (to obtain a list of all PDB entries sharing the same property or classification, click on the magnifying glass icon):

Chain Name UniProt Name of source organism % of UniProt sequence present in the sample Residues in the sample molecules % of residues observed
A Hemagglutinin-neuraminidase P04850 (37-565) (HN_SV5)search Simian virus 5 (strain W3)search 90% 532 83%

This entry contains 1 unique UniProt protein:

UniProt accession Name Organism PDB
P04850 (37 - 565) Hemagglutinin-neuraminidase Parainfluenza virus 5

Chain Sequence family (Pfam)
A (P04850) PF00423: Haemagglutinin-neuraminidasesearch

Chain ID Molecular function (GO) Biological process (GO) Cellular component (GO)
A (P04850) exo-alpha-sialidase activitysearch host cell surface receptor bindingsearch exo-alpha-(2->3)-sialidase activitysearch hydrolase activitysearch exo-alpha-(2->8)-sialidase activitysearch exo-alpha-(2->6)-sialidase activitysearch metabolic processsearch viral entry into host cellsearch viral life cyclesearch virion attachment to host cellsearch viral processsearch membranesearch viral envelopesearch integral component of membranesearch host cell membranesearch host cell plasma membranesearch virionsearch virion membranesearch

Chain InterPro annotation
A Haemagglutinin-neuraminidasesearch Sialidasessearch Haemagglutinin-neuraminidase, paramyxovirussearch