1wwe Summary


NMR Structure Determined for MLV NC complex with RNA Sequence UUUUGCU

The structure was published by Dey, A., York, D., Smalls-Mantey, A., and Summers, M.F., in 2005 in a paper entitled "Composition and sequence-dependent binding of RNA to the nucleocapsid protein of Moloney murine leukemia virus(,)" (abstract).

The structure was determined using NMR spectroscopy and deposited in 2005.

The experimental data on which the structure is based was also deposited.

This PDB entry contains a complex of 2 biomacromolecules, namely 5'-R(P*UP*UP*UP*UP*GP*CP*U)-3' and Nucleoprotein p10.

It also contains one or more heterogenic compounds (e.g., ligands, co-factors, ions, modified amino acids, etc.); see here for a complete list.

The molecule most likely forms heterodimers.

The following tables show cross-reference information to other databases (to obtain a list of all PDB entries sharing the same property or classification, click on the magnifying glass icon):

Chain Name UniProt Name of source organism % of UniProt sequence present in the sample Residues in the sample molecules % of residues observed
A Nucleoprotein p10 P03332 (479-534) (GAG_MLVMS)search Moloney murine leukemia virus isolate Shinnicksearch < 90% 56 100%

This entry contains 1 unique UniProt protein:

UniProt accession Name Organism PDB
P03332 (479 - 534) Nucleoprotein p10 Moloney murine leukemia virus

Chain Structural classification (SCOP) Sequence family (Pfam)
A Retrovirus zinc finger-like domainssearch Zinc knucklesearch

Chain ID Molecular function (GO)
A (P03332) zinc ion bindingsearch nucleic acid bindingsearch

Chain InterPro annotation
A Zinc finger, CCHC-typesearch