1uw8 Summary



The structure was published by Just, V.J., Stevenson, C.E.M., Bowater, L., Tanner, A., Lawson, D.M., and Bornemann, S., in 2004 in a paper entitled "A Closed Conformation of Bacillus Subtilis Oxalate Decarboxylase Oxdc Provides Evidence for the True Identity of the Active Site" (abstract).

This crystal structure was determined using X-ray diffraction at a resolution of 2.0 Å and deposited in 2004.

The experimental data on which the structure is based was also deposited.

The PDB entry contains the structure of OXALATE DECARBOXYLASE OXDC. This molecule has the UniProt identifier O34714 (OXDC_BACSU)search. The sample contained 385 residues which is 100% of the natural sequence. Out of 385 residues 375 were observed and are deposited in the PDB.

It also contains one or more heterogenic compounds (e.g., ligands, co-factors, ions, modified amino acids, etc.); see here for a complete list.

The molecule most likely forms homohexamers.

The following tables show cross-reference information to other databases (to obtain a list of all PDB entries sharing the same property or classification, click on the magnifying glass icon):

Chain Name UniProt Name of source organism % of UniProt sequence present in the sample Residues in the sample molecules % of residues observed
A OXALATE DECARBOXYLASE OXDC O34714 (1-385) (OXDC_BACSU)search Bacillus subtilis subsp. subtilis str. 168search 98% 385 97%

This entry contains 1 unique UniProt protein:

UniProt accession Name Organism PDB
O34714 (1 - 385) OXALATE DECARBOXYLASE OXDC Bacillus subtilis

Chain Structural classification (SCOP) Structural classification (CATH) Sequence family (Pfam)
A (O34714) Germin/Seed storage 7S proteinsearch Jelly Rollssearch PF00190: Cupinsearch

Chain ID Molecular function (GO) Cellular component (GO) Biological process (GO)
A (O34714) nutrient reservoir activitysearch oxalate decarboxylase activitysearch carboxy-lyase activitysearch metal ion bindingsearch lyase activitysearch cytoplasmsearch metabolic processsearch

Chain InterPro annotation
A Cupin 1search RmlC-like cupin domainsearch RmlC-like jelly roll foldsearch Bicupin, oxalate decarboxylase/oxidasesearch