› 1qry

Solution NMR

Homeobox protein VND (ventral nervous system defective protein)

Released:
DOI: 10.2210/pdb1qry/pdb
PDB entry 1qry coloured by chain, ensemble of 20 models, front view.
PDB entry 1qry coloured by chain, ensemble of 20 models, side view.
PDB entry 1qry coloured by chain, ensemble of 20 models, top view.
Source organism: Drosophila melanogaster
Primary publication:
Distortion of the three-dimensional structure of the vnd/NK-2 homeodomain bound to DNA induced by an embryonically lethal A35T point mutation.
Hwang KJ, Xiang B, Gruschus JM, Nam KY, No KT, Nirenberg M, Ferretti JA
Biochemistry 42 12522-31 (2003)
PMID: 14580198

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-149804 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Homeobox protein vnd Chain: A
Molecule details ›
Chain: A
Length: 80 amino acids
Theoretical weight: 9.75 KDa
Source organism: Drosophila melanogaster
Expression system: Escherichia coli
UniProt:
  • Canonical: P22808 (Residues: 538-613; Coverage: 11%)
Gene names: CG6172, NK2, vnd
Sequence domains: Homeodomain
Structure domains: Homeodomain-like

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Refinement method: simulated annealing
Expression system: Escherichia coli

Quick links

Citations

2 citation in other articles

Identification and analysis of vnd/NK-2 homeodomain binding sites in genomic DNA.
Wang et al. (2005)
1 more