› 1qbm

X-ray diffraction
2.37Å resolution

FAB E8B ANTIBODY, X-RAY STRUCTURE AT 2.37 ANGSTROMS RESOLUTION

Released:
DOI: 10.2210/pdb1qbm/pdb
PDB entry 1qbm coloured by chain, front view.
PDB entry 1qbm coloured by chain, side view.
PDB entry 1qbm coloured by chain, top view.
Source organism: Mus musculus
Primary publication:
Structural basis for the binding of an anti-cytochrome c antibody to its antigen: crystal structures of FabE8-cytochrome c complex to 1.8 A resolution and FabE8 to 2.26 A resolution.
Mylvaganam SE, Paterson Y, Getzoff ED
J Mol Biol 281 301-22 (1998)
PMID: 9698550

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
Cellular component:
Sequence domains:
Structure domains:

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-208466 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Immunoglobulin kappa chain variable 12-41 Chain: L
Molecule details ›
Chain: L
Length: 214 amino acids
Theoretical weight: 23.66 KDa
Source organism: Mus musculus
UniProt:
  • Canonical: P01635 (Residues: 21-115; Coverage: 100%)
Gene names: Gm16848, Igkv12-41
Sequence domains: Immunoglobulin V-set domain
Structure domains: Immunoglobulins
E8B ANTIBODY Chain: H
Molecule details ›
Chain: H
Length: 219 amino acids
Theoretical weight: 23.51 KDa
Source organism: Mus musculus
Structure domains: Immunoglobulins

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Spacegroup: P21
Unit cell:
a: 44.96Å b: 85.01Å c: 63.33Å
α: 90° β: 105° γ: 90°
R-values:
R R work R free
0.194 0.194 0.269

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Citations

1 review citation

HLA epitope matching in pediatric renal transplantation.
Sypek et al. (2017)
41 other articles