1pdp Summary

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Fitting of gp9 structure into the bacteriophage T4 baseplate cryoEM reconstruction

The structure was published by Kostyuchenko, V.A., Leiman, P.G., Chipman, P.R., et al., Arisaka, F., Mesyanzhinov, V.V., and Rossmann, M.G., in 2003 in a paper entitled "Three-dimensional structure of the bacteriophage T4 baseplate" (abstract).

The structure was determined using Electron microscopy at a resolution of 12.0 Å and deposited in 2003.

The experimental data on which the structure is based was deposited separately in EMDB as entry 1048.

This PDB entry contains multiple copies of the structure of Baseplate structural protein Gp9.

The most likely quaternary structure is a meric assembly.

The following tables show cross-reference information to other databases (to obtain a list of all PDB entries sharing the same property or classification, click on the magnifying glass icon):


Chain Name UniProt Name of source organism % of UniProt sequence present in the sample Residues in the sample molecules % of residues observed
A Baseplate structural protein Gp9 P10927 (1-288) (VG09_BPT4)search Enterobacteria phage T4search 100% 288 100%
B Baseplate structural protein Gp9 P10927 (1-288) (VG09_BPT4)search Enterobacteria phage T4search 100% 288 100%
C Baseplate structural protein Gp9 P10927 (1-288) (VG09_BPT4)search Enterobacteria phage T4search 100% 288 100%
D Baseplate structural protein Gp9 P10927 (1-288) (VG09_BPT4)search Enterobacteria phage T4search 100% 288 100%
E Baseplate structural protein Gp9 P10927 (1-288) (VG09_BPT4)search Enterobacteria phage T4search 100% 288 100%
F Baseplate structural protein Gp9 P10927 (1-288) (VG09_BPT4)search Enterobacteria phage T4search 100% 288 100%
G Baseplate structural protein Gp9 P10927 (1-288) (VG09_BPT4)search Enterobacteria phage T4search 100% 288 100%
H Baseplate structural protein Gp9 P10927 (1-288) (VG09_BPT4)search Enterobacteria phage T4search 100% 288 100%
I Baseplate structural protein Gp9 P10927 (1-288) (VG09_BPT4)search Enterobacteria phage T4search 100% 288 100%
J Baseplate structural protein Gp9 P10927 (1-288) (VG09_BPT4)search Enterobacteria phage T4search 100% 288 100%
K Baseplate structural protein Gp9 P10927 (1-288) (VG09_BPT4)search Enterobacteria phage T4search 100% 288 100%
L Baseplate structural protein Gp9 P10927 (1-288) (VG09_BPT4)search Enterobacteria phage T4search 100% 288 100%
M Baseplate structural protein Gp9 P10927 (1-288) (VG09_BPT4)search Enterobacteria phage T4search 100% 288 100%
N Baseplate structural protein Gp9 P10927 (1-288) (VG09_BPT4)search Enterobacteria phage T4search 100% 288 100%
O Baseplate structural protein Gp9 P10927 (1-288) (VG09_BPT4)search Enterobacteria phage T4search 100% 288 100%
P Baseplate structural protein Gp9 P10927 (1-288) (VG09_BPT4)search Enterobacteria phage T4search 100% 288 100%
Q Baseplate structural protein Gp9 P10927 (1-288) (VG09_BPT4)search Enterobacteria phage T4search 100% 288 100%
R Baseplate structural protein Gp9 P10927 (1-288) (VG09_BPT4)search Enterobacteria phage T4search 100% 288 100%


This entry contains 1 unique UniProt protein:

UniProt accession Name Organism PDB
P10927 (1 - 288) Baseplate structural protein Gp9 Enterobacteria phage T4

Chain Structural classification (SCOP) Sequence family (Pfam)
A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R (P10927) Bacteriophage T4 3D cryo-EM reconstructionsearch PF07880: Bacteriophage T4 gp9/10-like proteinsearch

Chain ID Cellular component (GO) Biological process (GO)
A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R (P10927) virionsearch viral life cyclesearch

Chain InterPro annotation
A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R Baseplate structural protein Gp9/Gp10search Baseplate structural protein Gp9 middle domainsearch Baseplate structural protein Gp9 C-terminal domainsearch