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PDBe Entry: 1ofm view

CRYSTAL STRUCTURE OF CHONDROITINASE B COMPLEXED TO CHONDROITIN 4-SULFATE TETRASACCHARIDE
Summary
Header LYASEsearch
Method X-RAY DIFFRACTION
Experiment Resolution: 1.8 Å, R-factor: 14.2%, Free R-factor: 18.3%, Spacegroup: P 1 21 1
Released 19/04/2004, deposition: 15/04/2003, last revision: 24/11/2009
Authors Michel, G.search; Cygler, M.search
Primary citation The Structure of Chondroitin B Lyase Complexed with Glycosaminoglycan Oligosaccharides Unravels a Calcium-Dependent Catalytic Machinery
J.BIOL.CHEM.search vol:279, pag:32882 (2004) [PubMed ID 15155751 ]search
Keywords ACTIVE SITEsearch, BETA-ELIMINATIONsearch, CHONDROITIN 4-SULFATEsearch, LYASEsearch
EC 4.2.2.19 ExPASy BRENDA search (A)
Organism Pedobacter heparinus 984search(A)
UniProt Chondroitinase-B precursor (EC 4.2.2.19) (Chondroitin-B lyase) (Chondroitin sulfate B lyase) (Chondroitin-B eliminase) Q46079search (A)
Solvent A
Related entries 1dbg, 1dbo, 1ofl
Polymers
Id Name Type UniProt Residues Observed
A CHONDROITINASE B Protein Q46079 (CSLB_PEDHD)search
481 100%
Heterogens
Id Name Ligands
A SUGAR (4-MER) MAN search RAM search GCU search XYP search
A 6-DEOXY-2-O-METHYL-ALPHA-L-GALACTOPYRANOSE MXZ search
A SUGAR (ALPHA D-GALACTOSE) GLA search
A SUGAR (BETA-D-GLUCOSE) BGC search
A SUGAR (4-MER) ASG search BDP search DGC search
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