1o1m Summary

pdbe.org/1o1m
spacer

Deoxy hemoglobin (A-GLYGLYGLY-C:V1M,L29F,H58Q B,D:V1M,V67W)

The structure has not been published. The depositing authors are Brucker, E.A.search

This crystal structure was determined using X-ray diffraction at a resolution of 1.85 Å and deposited in 2002.

The experimental data on which the structure is based was also deposited.

This PDB entry contains a complex of 2 biomacromolecules, namely Hemoglobin Alpha chain and Hemoglobin Beta chain.

It also contains one or more heterogenic compounds (e.g., ligands, co-factors, ions, modified amino acids, etc.); see here for a complete list.

The molecule most likely forms heterotrimers.

The following tables show cross-reference information to other databases (to obtain a list of all PDB entries sharing the same property or classification, click on the magnifying glass icon):


Chain Name UniProt Name of source organism % of UniProt sequence present in the sample Residues in the sample molecules % of residues observed
A Hemoglobin Alpha chain P69905 (2-142) (HBA_HUMAN)search Homo sapienssearch 98% 285 98%
B Hemoglobin Beta chain P68871 (2-147) (HBB_HUMAN)search Homo sapienssearch 98% 146 100%
D Hemoglobin Beta chain P68871 (2-147) (HBB_HUMAN)search Homo sapienssearch 98% 146 100%


This entry contains 2 unique UniProt proteins:

UniProt accession Name Organism PDB
P69905 (2 - 142) Hemoglobin Alpha chain Homo sapiens
P68871 (2 - 147) Hemoglobin Beta chain Homo sapiens

Chain Structural classification (SCOP) Structural classification (CATH) Sequence family (Pfam)
A (P69905) Globinssearch Globinssearch PF00042: Globinsearch
B, D (P68871) Globinssearch Globinssearch PF00042: Globinsearch

Chain ID Biological process (GO) Molecular function (GO) Cellular component (GO)
A (P69905) oxygen transportsearch bicarbonate transportsearch protein heterooligomerizationsearch positive regulation of cell deathsearch response to hydrogen peroxidesearch hydrogen peroxide catabolic processsearch oxidation-reduction processsearch small molecule metabolic processsearch transportsearch heme bindingsearch protein bindingsearch oxygen transporter activitysearch metal ion bindingsearch iron ion bindingsearch haptoglobin bindingsearch oxygen bindingsearch peroxidase activitysearch extracellular regionsearch hemoglobin complexsearch extracellular vesicular exosomesearch cytosolsearch membranesearch haptoglobin-hemoglobin complexsearch blood microparticlesearch cytosolic small ribosomal subunitsearch endocytic vesicle lumensearch
B, D (P68871) response to hydrogen peroxidesearch oxygen transportsearch transportsearch small molecule metabolic processsearch bicarbonate transportsearch protein heterooligomerizationsearch blood coagulationsearch oxidation-reduction processsearch positive regulation of nitric oxide biosynthetic processsearch hydrogen peroxide catabolic processsearch platelet aggregationsearch renal absorptionsearch positive regulation of cell deathsearch regulation of blood pressuresearch regulation of blood vessel sizesearch nitric oxide transportsearch protein bindingsearch oxygen transporter activitysearch metal ion bindingsearch iron ion bindingsearch heme bindingsearch oxygen bindingsearch hemoglobin bindingsearch haptoglobin bindingsearch peroxidase activitysearch extracellular regionsearch cytosolsearch hemoglobin complexsearch blood microparticlesearch endocytic vesicle lumensearch haptoglobin-hemoglobin complexsearch extracellular vesicular exosomesearch

Chain InterPro annotation
A Globinsearch Haemoglobin, alphasearch Haemoglobin, pisearch Globin-likesearch Globin, structural domainsearch
B, D Globinsearch Haemoglobin, betasearch Globin-likesearch Globin, structural domainsearch