1nte Summary

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CRYSTAL STRUCTURE ANALYSIS OF THE SECOND PDZ DOMAIN OF SYNTENIN

The structure was published by Kang, B.S., Cooper, D.R., Devedjiev, Y., Derewenda, U., and Derewenda, Z.S., in 2003 in a paper entitled "Molecular roots of degenerate specificity in syntenin's PDZ2 domain: reassessment of the PDZ recognition paradigm." (abstract).

This crystal structure was determined using X-ray diffraction at a resolution of 1.24 Å and deposited in 2003.

The experimental data on which the structure is based was also deposited.

The PDB entry contains the structure of Syntenin 1. This molecule has the UniProt identifier O00560 (SDCB1_HUMAN)search. The sample contained 82 residues which is < 90% of the natural sequence. Out of 82 residues 82 were observed and are deposited in the PDB.

It also contains one or more heterogenic compounds (e.g., ligands, co-factors, ions, modified amino acids, etc.); see here for a complete list.

The molecule is most likely monomeric.

The following tables show cross-reference information to other databases (to obtain a list of all PDB entries sharing the same property or classification, click on the magnifying glass icon):


Chain Name UniProt Name of source organism % of UniProt sequence present in the sample Residues in the sample molecules % of residues observed
A Syntenin 1 O00560 (197-273) (SDCB1_HUMAN)search Homo sapienssearch < 90% 82 100%


This entry contains 1 unique UniProt protein:

UniProt accession Name Organism PDB
O00560 (197 - 273) Syntenin 1 Homo sapiens

Chain Structural classification (SCOP) Structural classification (CATH) Sequence family (Pfam)
A PDZ domainsearch Pdz3 Domainsearch PDZ domain (Also known as DHR or GLGF)search
Chain InterPro annotation
A PDZ domainsearch