› 1lmq

X-ray diffraction
1.6Å resolution

THE CRYSTAL STRUCTURES OF THREE COMPLEXES BETWEEN CHITOOLIGOSACCHARIDES AND LYSOZYME FROM THE RAINBOW TROUT

Released:
DOI: 10.2210/pdb1lmq/pdb
PDB entry 1lmq coloured by chain, front view.
PDB entry 1lmq coloured by chain, side view.
PDB entry 1lmq coloured by chain, top view.
Source organism: Oncorhynchus mykiss
Primary publication:
Crystal structures of three complexes between chito-oligosaccharides and lysozyme from the rainbow trout. How distorted is the NAG sugar in site D?
Karlsen S, Hough E
Acta Crystallogr D Biol Crystallogr 51 962-78 (1995)
PMID: 15299765

Function and Biology Details

Reaction catalysed: 
Hydrolysis of (1->4)-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues in a peptidoglycan and between N-acetyl-D-glucosamine residues in chitodextrins
Biochemical function:
Biological process:
Cellular component:
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-146006 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecules (2 distinct):
Lysozyme C II Chain: A
Molecule details ›
Chain: A
Length: 129 amino acids
Theoretical weight: 14.3 KDa
Source organism: Oncorhynchus mykiss
UniProt:
  • Canonical: P11941 (Residues: 16-144; Coverage: 100%)
Sequence domains: C-type lysozyme/alpha-lactalbumin family
Structure domains: Lysozyme

Ligands and Environments

Carbohydrate polymer : NEW Components: NDG, NAG
Carbohydrate polymer
No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Spacegroup: P3121
Unit cell:
a: 76.58Å b: 76.58Å c: 54.19Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.165 not available not available

Quick links

Citations

3 citation in other articles

TonB-dependent transporters and their occurrence in cyanobacteria.
Mirus et al. (2009)
2 more

4 mentions without citation

Crystallographic refinement of ligand complexes.
Kleywegt GJ. (2007)
3 more