1ko6

X-ray diffraction
3Å resolution

Crystal Structure of C-terminal Autoproteolytic Domain of Nucleoporin Nup98

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero tetramer (preferred)
PDBe Complex ID:
PDB-CPX-156683 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Nuclear pore complex protein Nup98 Chains: A, C
Molecule details ›
Chains: A, C
Length: 187 amino acids
Theoretical weight: 21.2 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: P52948 (Residues: 695-880; Coverage: 10%)
Gene names: ADAR2, NUP98
Sequence domains: Nucleoporin autopeptidase
Structure domains: Peptidase S59, nucleoporin
Nuclear pore complex protein Nup96 Chains: B, D
Molecule details ›
Chains: B, D
Length: 64 amino acids
Theoretical weight: 7.11 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: P52948 (Residues: 881-942; Coverage: 3%)
Gene names: ADAR2, NUP98

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: NSLS BEAMLINE X26C
Spacegroup: P41212
Unit cell:
a: 89.9Å b: 89.9Å c: 203.2Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.247 0.247 0.271
Expression system: Escherichia coli