1jdi Summary

pdbe.org/1jdi
spacer

CRYSTAL STRUCTURE OF L-RIBULOSE-5-PHOSPHATE 4-EPIMERASE

The structure was published by Luo, Y., Samuel, J., Mosimann, S.C., Lee, J.E., Tanner, M.E., and Strynadka, N.C., in 2001 in a paper entitled "The structure of L-ribulose-5-phosphate 4-epimerase: an aldolase-like platform for epimerization." (abstract).

This crystal structure was determined using X-ray diffraction at a resolution of 2.4 Å and deposited in 2001.

The experimental data on which the structure is based was also deposited.

This PDB entry contains multiple copies of the structure of L-RIBULOSE 5 PHOSPHATE 4-EPIMERASE.

It also contains one or more heterogenic compounds (e.g., ligands, co-factors, ions, modified amino acids, etc.); see here for a complete list.

The molecule has more than one probable quaternary state observed. For more details see the quaternary structure page.

The following tables show cross-reference information to other databases (to obtain a list of all PDB entries sharing the same property or classification, click on the magnifying glass icon):


Chain Name UniProt Name of source organism % of UniProt sequence present in the sample Residues in the sample molecules % of residues observed
A L-RIBULOSE 5 PHOSPHATE 4-EPIMERASE P08203 (1-231) (ARAD_ECOLI)search Escherichia coli K-12search 100% 231 96%
B L-RIBULOSE 5 PHOSPHATE 4-EPIMERASE P08203 (1-231) (ARAD_ECOLI)search Escherichia coli K-12search 100% 231 96%
C L-RIBULOSE 5 PHOSPHATE 4-EPIMERASE P08203 (1-231) (ARAD_ECOLI)search Escherichia coli K-12search 100% 231 96%
D L-RIBULOSE 5 PHOSPHATE 4-EPIMERASE P08203 (1-231) (ARAD_ECOLI)search Escherichia coli K-12search 100% 231 96%
E L-RIBULOSE 5 PHOSPHATE 4-EPIMERASE P08203 (1-231) (ARAD_ECOLI)search Escherichia coli K-12search 100% 231 96%
F L-RIBULOSE 5 PHOSPHATE 4-EPIMERASE P08203 (1-231) (ARAD_ECOLI)search Escherichia coli K-12search 100% 231 96%


This entry contains 1 unique UniProt protein:

UniProt accession Name Organism PDB
P08203 (1 - 231) L-RIBULOSE 5 PHOSPHATE 4-EPIMERASE Escherichia coli K-12

Chain Structural classification (SCOP) Structural classification (CATH) Sequence family (Pfam)
A, B, C, D, E, F (P08203) AraD-like aldolase/epimerasesearch L-fuculose-1-phosphate Aldolasesearch PF00596: Class II Aldolase and Adducin N-terminal domainsearch

Chain ID Molecular function (GO) Biological process (GO)
A, B, C, D, E, F (P08203) L-ribulose-phosphate 4-epimerase activitysearch zinc ion bindingsearch metal ion bindingsearch isomerase activitysearch L-arabinose catabolic processsearch L-lyxose metabolic processsearch arabinose catabolic processsearch L-arabinose catabolic process to xylulose 5-phosphatesearch carbohydrate metabolic processsearch

Chain InterPro annotation
A, B, C, D, E, F Class II aldolase/adducin N-terminalsearch L-ribulose-5-phosphate 4-epimerasesearch