1jc5 Summary

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Crystal Structure of Native Methylmalonyl-CoA Epimerase

The structure was published by McCarthy, A.A., Baker, H.M., Shewry, S.C., Patchett, M.L., and Baker, E.N., in 2001 in a paper entitled "Crystal structure of methylmalonyl-coenzyme A epimerase from P. shermanii: a novel enzymatic function on an ancient metal binding scaffold." (abstract).

This crystal structure was determined using X-ray diffraction at a resolution of 2.2 Å and deposited in 2001.

The experimental data on which the structure is based was also deposited.

This PDB entry contains multiple copies of the structure of Methylmalonyl-CoA Epimerase.

It also contains one or more heterogenic compounds (e.g., ligands, co-factors, ions, modified amino acids, etc.); see here for a complete list.

The molecule has more than one probable quaternary state observed. For more details see the quaternary structure page.

The following tables show cross-reference information to other databases (to obtain a list of all PDB entries sharing the same property or classification, click on the magnifying glass icon):


Chain Name UniProt Name of source organism % of UniProt sequence present in the sample Residues in the sample molecules % of residues observed
A Methylmalonyl-CoA Epimerase Q8VQN0 (1-148) (Q8VQN0_PROFR)search Propionibacterium freudenreichii subsp. shermaniisearch 100% 148 99%
B Methylmalonyl-CoA Epimerase Q8VQN0 (1-148) (Q8VQN0_PROFR)search Propionibacterium freudenreichii subsp. shermaniisearch 100% 148 99%
C Methylmalonyl-CoA Epimerase Q8VQN0 (1-148) (Q8VQN0_PROFR)search Propionibacterium freudenreichii subsp. shermaniisearch 100% 148 99%
D Methylmalonyl-CoA Epimerase Q8VQN0 (1-148) (Q8VQN0_PROFR)search Propionibacterium freudenreichii subsp. shermaniisearch 100% 148 99%
E Methylmalonyl-CoA Epimerase Q8VQN0 (1-148) (Q8VQN0_PROFR)search Propionibacterium freudenreichii subsp. shermaniisearch 100% 148 99%
F Methylmalonyl-CoA Epimerase Q8VQN0 (1-148) (Q8VQN0_PROFR)search Propionibacterium freudenreichii subsp. shermaniisearch 100% 148 99%


This entry contains 1 unique UniProt protein:

UniProt accession Name Organism PDB
Q8VQN0 (1 - 148) Methylmalonyl-CoA Epimerase Propionibacterium freudenreichii subsp. shermanii

Chain Structural classification (SCOP) Structural classification (CATH) Sequence family (Pfam)
A, B, C, D, E, F (Q8VQN0) Methylmalonyl-CoA epimerasesearch 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1search PF13669: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamilysearch

Chain ID Molecular function (GO)
A, B, C, D, E, F (Q8VQN0) isomerase activitysearch methylmalonyl-CoA epimerase activitysearch

Chain InterPro annotation
A, B, C, D, E, F Methylmalonyl-CoA epimerasesearch