1iyf Summary


Solution structure of ubiquitin-like domain of human parkin

The structure was published by Sakata, E., Yamaguchi, Y., Kurimoto, E., et al., Mizuno, Y., Tanaka, K., and Kato, K., in 2003 in a paper entitled "Parkin binds the Rpn10 subunit of 26S proteasomes through its ubiquitin-like domain" (abstract).

The structure was determined using NMR spectroscopy and deposited in 2002.

The experimental data on which the structure is based was not deposited.

The PDB entry contains the structure of parkin. This molecule has the UniProt identifier O60260 (PRKN2_HUMAN)search. The sample contained 81 residues which is < 90% of the natural sequence. Out of 81 residues 76 were observed and are deposited in the PDB.

The molecule is most likely monomeric.

The following tables show cross-reference information to other databases (to obtain a list of all PDB entries sharing the same property or classification, click on the magnifying glass icon):

Chain Name UniProt Name of source organism % of UniProt sequence present in the sample Residues in the sample molecules % of residues observed
A parkin O60260 (1-76) (PRKN2_HUMAN)search Homo sapienssearch < 90% 81 93%

This entry contains 1 unique UniProt protein:

UniProt accession Name Organism PDB
O60260 (1 - 76) parkin Homo sapiens

Chain Structural classification (SCOP) Structural classification (CATH) Sequence family (Pfam)
A Ubiquitin-relatedsearch Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1search Ubiquitin familysearch
Chain InterPro annotation
A Ubiquitin-likesearch Ubiquitinsearch Ubiquitin-related domainsearch