› 1ih9

Solution NMR

NMR Structure of Zervamicin IIB (peptaibol antibiotic) Bound to DPC Micelles

Released:
DOI: 10.2210/pdb1ih9/pdb
PDB entry 1ih9 coloured by chain, ensemble of 20 models, front view.
PDB entry 1ih9 coloured by chain, ensemble of 20 models, side view.
PDB entry 1ih9 coloured by chain, ensemble of 20 models, top view.
Source organism: Emericellopsis salmosynnemata
Primary publication:
Spatial structure of zervamicin IIB bound to DPC micelles: implications for voltage-gating.
Shenkarev ZO, Balashova TA, Efremov RG, Yakimenko ZA, Ovchinnikova TV, Raap J, Arseniev AS
Biophys J 82 762-71 (2002)
PMID: 11806918

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Structure domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-162243 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
ZERVAMICIN IIB Chain: A
Molecule details ›
Chain: A
Length: 17 amino acids
Theoretical weight: 1.82 KDa
Source organism: Emericellopsis salmosynnemata

Ligands and Environments

No bound ligands
4 modified residues:
Ligand DIV 1 x DIV
Ligand AIB 4 x AIB
Ligand HYP 2 x HYP
Ligand PHL 1 x PHL

Experiments and Validation Details

Entry percentile scores
Refinement method: SIMULATED ANNELING. ENERGY MINIMISATION.

Quick links

Citations

3 review citations

Aib residues in peptaibiotics and synthetic sequences: analysis of nonhelical conformations.
Aravinda et al. (2008)
2 more

2 mentions without citation

The role of hydrophobic interactions in positioning of peripheral proteins in membranes.
Lomize et al. (2007)
1 more