1i7g Summary

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CRYSTAL STRUCTURE OF THE LIGAND BINDING DOMAIN FROM HUMAN PPAR-ALPHA IN COMPLEX WITH THE AGONIST AZ 242

The structure was published by Cronet, P., Petersen, J.F., Folmer, R., et al., Karlsson, U., Lindstedt, E.L., and Bamberg, K., in 2001 in a paper entitled "Structure of the PPARalpha and -gamma ligand binding domain in complex with AZ 242; ligand selectivity and agonist activation in the PPAR family." (abstract).

This crystal structure was determined using X-ray diffraction at a resolution of 2.2 Å and deposited in 2001.

The experimental data on which the structure is based was not deposited.

The PDB entry contains the structure of PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR ALPHA. This molecule has the UniProt identifier Q07869 (PPARA_HUMAN)search. The sample contained 287 residues which is < 90% of the natural sequence. Out of 287 residues 259 were observed and are deposited in the PDB.

It also contains one or more heterogenic compounds (e.g., ligands, co-factors, ions, modified amino acids, etc.); see here for a complete list.

The molecule is most likely monomeric.

The following tables show cross-reference information to other databases (to obtain a list of all PDB entries sharing the same property or classification, click on the magnifying glass icon):


Chain Name UniProt Name of source organism % of UniProt sequence present in the sample Residues in the sample molecules % of residues observed
A PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR ALPHA Q07869 (196-468) (PPARA_HUMAN)search Homo sapienssearch < 90% 287 90%


This entry contains 1 unique UniProt protein:

UniProt accession Name Organism PDB
Q07869 (196 - 468) PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR ALPHA Homo sapiens

Chain Structural classification (SCOP) Structural classification (CATH) Sequence family (Pfam)
A Nuclear receptor ligand-binding domainsearch Retinoid X Receptorsearch Ligand-binding domain of nuclear hormone receptorsearch

Chain ID Biological process (GO) Molecular function (GO) Cellular component (GO)
A (Q07869) regulation of transcription, DNA-templatedsearch steroid hormone mediated signaling pathwaysearch ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activitysearch DNA bindingsearch sequence-specific DNA binding transcription factor activitysearch steroid hormone receptor activitysearch nucleussearch

Chain InterPro annotation
A Nuclear hormone receptor, ligand-binding, coresearch Steroid hormone receptorsearch Peroxisome proliferator-activated receptorsearch Peroxisome proliferator-activated receptor, alphasearch Nuclear hormone receptor, ligand-bindingsearch