1fpn Summary

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HUMAN RHINOVIRUS SEROTYPE 2 (HRV2)

The structure was published by Verdaguer, N., Blaas, D., and Fita, I., in 2000 in a paper entitled "Structure of human rhinovirus serotype 2 (HRV2)." (abstract).

This crystal structure was determined using X-ray diffraction at a resolution of 2.6 Å and deposited in 2000.

The experimental data on which the structure is based was not deposited.

This entry contains 9 copies of 4 unique biopolymers (complete list).

It also contains one or more heterogenic compounds (e.g., ligands, co-factors, ions, modified amino acids, etc.); see here for a complete list.

The molecule has more than one probable quaternary state observed. For more details see the quaternary structure page.

The following tables show cross-reference information to other databases (to obtain a list of all PDB entries sharing the same property or classification, click on the magnifying glass icon):


Chain Name UniProt Name of source organism % of UniProt sequence present in the sample Residues in the sample molecules % of residues observed
1 COAT PROTEIN VP1 P04936 (568-856) (POLG_HRV2)search Human rhinovirus A2search < 90% 289 93%
2 COAT PROTEIN VP2 P04936 (70-330) (POLG_HRV2)search Human rhinovirus A2search < 90% 261 95%
3 COAT PROTEIN VP3 P04936 (331-567) (POLG_HRV2)search Human rhinovirus A2search < 90% 237 100%
4 COAT PROTEIN VP4 P04936 (2-69) (POLG_HRV2)search Human rhinovirus A2search < 90% 68 36%


This entry contains 1 unique UniProt protein:

UniProt accession Name Organism PDB
P04936 (568 - 856) COAT PROTEIN VP1 Human rhinovirus A2

Chain Structural classification (SCOP) Structural classification (CATH) Sequence family (Pfam)
1 Picornaviridae-like VP (VP1, VP2, VP3 and VP4)search Jelly Rollssearch picornavirus capsid proteinsearch
2 Picornaviridae-like VP (VP1, VP2, VP3 and VP4)search Jelly Rollssearch picornavirus capsid proteinsearch
3 Picornaviridae-like VP (VP1, VP2, VP3 and VP4)search Jelly Rollssearch picornavirus capsid proteinsearch
4 Picornaviridae-like VP (VP1, VP2, VP3 and VP4)search Rhinovirus 14, subunit 4search Picornavirus coat protein (VP4)search

Chain ID Molecular function (GO) Cellular component (GO)
1 (P04936) structural molecule activitysearch viral capsidsearch
2 (P04936) structural molecule activitysearch viral capsidsearch
3 (P04936) structural molecule activitysearch viral capsidsearch
4 (P04936) structural molecule activitysearch viral capsidsearch

Chain InterPro annotation
1 Picornavirus capsidsearch Viral coat protein subunitsearch
2 Picornavirus capsidsearch Viral coat protein subunitsearch
3 Picornavirus capsidsearch Viral coat protein subunitsearch
4 Picornavirus coat protein VP4search