1fa0 Summary

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STRUCTURE OF YEAST POLY(A) POLYMERASE BOUND TO MANGANATE AND 3'-DATP

The structure was published by Bard, J., Zhelkovsky, A.M., Helmling, S., Earnest, T.N., Moore, C.L., and Bohm, A., in 2000 in a paper entitled "Structure of yeast poly(A) polymerase alone and in complex with 3'-dATP." (abstract).

This crystal structure was determined using X-ray diffraction at a resolution of 2.6 Å and deposited in 2000.

The experimental data on which the structure is based was not deposited.

This PDB entry contains multiple copies of the structure of POLY(A)-POLYMERASE.

It also contains one or more heterogenic compounds (e.g., ligands, co-factors, ions, modified amino acids, etc.); see here for a complete list.

The molecule has more than one probable quaternary state observed. For more details see the quaternary structure page.

The following tables show cross-reference information to other databases (to obtain a list of all PDB entries sharing the same property or classification, click on the magnifying glass icon):


Chain Name UniProt Name of source organism % of UniProt sequence present in the sample Residues in the sample molecules % of residues observed
A POLY(A)-POLYMERASE P29468 (1-537) (PAP_YEAST)search Saccharomyces cerevisiae S288csearch 92% 537 95%
B POLY(A)-POLYMERASE P29468 (1-537) (PAP_YEAST)search Saccharomyces cerevisiae S288csearch 92% 537 95%


This entry contains 1 unique UniProt protein:

UniProt accession Name Organism PDB
P29468 (1 - 537) POLY(A)-POLYMERASE Saccharomyces cerevisiae

Chain Structural classification (SCOP) Structural classification (CATH) Sequence family (Pfam)
A, B (P29468) Poly(A) polymerase, PAP, C-terminal domainsearch, Poly(A) polymerase, PAP, middle domainsearch, Poly(A) polymerase, PAP, N-terminal domainsearch Alpha-Beta Plaitssearch, Beta Polymerase, domain 2search, Poly(a)-polymerase, middle domainsearch PF01909: Nucleotidyltransferase domainsearch, PF04926: Poly(A) polymerase predicted RNA binding domainsearch, PF04928: Poly(A) polymerase central domainsearch

Chain ID Biological process (GO) Molecular function (GO) Cellular component (GO)
A, B (P29468) RNA polyadenylationsearch mRNA polyadenylationsearch snoRNA polyadenylationsearch mRNA processingsearch RNA 3'-end processingsearch polynucleotide adenylyltransferase activitysearch protein bindingsearch RNA bindingsearch ATP bindingsearch magnesium ion bindingsearch nucleotidyltransferase activitysearch metal ion bindingsearch transferase activitysearch nucleotide bindingsearch nucleussearch nucleoplasmsearch mRNA cleavage and polyadenylation specificity factor complexsearch

Chain InterPro annotation
A, B Nucleotidyl transferase domainsearch Poly(A) polymerase, RNA-binding domainsearch Poly(A) polymerase, central domainsearch Nucleotidyltransferase, class I, C-terminal-likesearch Poly(A) polymerasesearch