› 1df6

Solution NMR

1H NMR SOLUTION STRUCTURE OF CYCLOVIOLACIN O1

Released:
DOI: 10.2210/pdb1df6/pdb
PDB entry 1df6 coloured by chain, ensemble of 16 models, front view.
PDB entry 1df6 coloured by chain, ensemble of 16 models, side view.
PDB entry 1df6 coloured by chain, ensemble of 16 models, top view.
Source organism: Viola odorata
Primary publication:
Plant cyclotides: A unique family of cyclic and knotted proteins that defines the cyclic cystine knot structural motif.
Craik DJ, Daly NL, Bond T, Waine C
J Mol Biol 294 1327-36 (1999)
PMID: 10600388

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
Cellular component:
  • not assigned
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-160612 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Cycloviolacin-O1 Chain: A
Molecule details ›
Chain: A
Length: 30 amino acids
Theoretical weight: 3.14 KDa
Source organism: Viola odorata
UniProt:
  • Canonical: P82230 (Residues: 7-30; Coverage: 80%)
Sequence domains: Cyclotide family

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Refinement method: DISTANCE GEOMETRY, SIMULATED ANNEALING, MOLECULAR DYNAMICS

Quick links

Citations

101 review citations

Ribosomally synthesized and post-translationally modified peptide natural products: overview and recommendations for a universal nomenclature.
Arnison et al. (2013)
100 more

3 mentions without citation

Resistance is futile: targeting multidrug-resistant bacteria with de novo Cys-rich cyclic polypeptides.
Mourenza et al. (2023)
2 more