› 1d16

X-ray diffraction
2.1Å resolution

STRUCTURE OF A T4 HAIRPIN LOOP ON A Z-DNA STEM AND COMPARISON WITH A-RNA AND B-DNA LOOPS

Released:
DOI: 10.2210/pdb1d16/pdb
PDB entry 1d16 coloured by chain, front view.
PDB entry 1d16 coloured by chain, side view.
PDB entry 1d16 coloured by chain, top view.
Source organism: Synthetic construct
Primary publication:
Structure of a T4 hairpin loop on a Z-DNA stem and comparison with A-RNA and B-DNA loops.
Chattopadhyaya R, Grzeskowiak K, Dickerson RE
J Mol Biol 211 189-210 (1990)
PMID: 2299669

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-113576 (preferred)
Entry contents:
1 distinct DNA molecule
Macromolecule:
DNA (5'-D(*CP*GP*CP*GP*CP*GP*TP*TP*TP*TP*CP*GP*CP*GP*CP*G)-3') Chain: A
Molecule details ›
Chain: A
Length: 16 nucleotides
Theoretical weight: 4.88 KDa
Source organism: Synthetic construct
Expression system: Not provided

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Spacegroup: C2
Unit cell:
a: 57.18Å b: 21.63Å c: 36.4Å
α: 90° β: 95.22° γ: 90°
R-values:
R R work R free
0.2 not available not available
Expression system: Not provided

Quick links

Citations

17 citation in other articles

3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures.
Lu et al. (2003)
16 more

4 mentions without citation

Exploring transmembrane transport through alpha-hemolysin with grid-steered molecular dynamics.
Wells et al. (2007)
3 more