1cl4 Summary

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NUCLEOCAPSID PROTEIN FROM MASON-PFIZER MONKEY VIRUS (MPMV)

The structure was published by Gao, Y., Kaluarachchi, K., and Giedroc, D.P., in 1998 in a paper entitled "Solution structure and backbone dynamics of Mason-Pfizer monkey virus (MPMV) nucleocapsid protein." (abstract).

The structure was determined using NMR spectroscopy and deposited in 1999.

The experimental data on which the structure is based was also deposited.

The PDB entry contains the structure of PROTEIN (GAG POLYPROTEIN). This molecule has the UniProt identifier P07567 (GAG_MPMV)search. The sample contained 60 residues which is < 90% of the natural sequence. Out of 60 residues 32 were observed and are deposited in the PDB.

It also contains one or more heterogenic compounds (e.g., ligands, co-factors, ions, modified amino acids, etc.); see here for a complete list.

The molecule is most likely monomeric.

The following tables show cross-reference information to other databases (to obtain a list of all PDB entries sharing the same property or classification, click on the magnifying glass icon):


Chain Name UniProt Name of source organism % of UniProt sequence present in the sample Residues in the sample molecules % of residues observed
A PROTEIN (GAG POLYPROTEIN) P07567 (546-605) (GAG_MPMV)search Mason-Pfizer monkey virussearch < 90% 60 53%


This entry contains 1 unique UniProt protein:

UniProt accession Name Organism PDB
P07567 (546 - 605) PROTEIN (GAG POLYPROTEIN) Mason-Pfizer monkey virus

Chain Structural classification (SCOP) Structural classification (CATH) Sequence family (Pfam)
A Retrovirus zinc finger-like domainssearch HIV-1 Nucleocapsid Proteinsearch Zinc knucklesearch, GAG-polyprotein viral zinc-fingersearch

Chain ID Molecular function (GO)
A (P07567) zinc ion bindingsearch nucleic acid bindingsearch

Chain InterPro annotation
A Zinc finger, CCHC-typesearch