1b54 Summary

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CRYSTAL STRUCTURE OF A YEAST HYPOTHETICAL PROTEIN-A STRUCTURE FROM BNL'S HUMAN PROTEOME PROJECT

The structure was published by Eswaramoorthy, S., Gerchman, S., Graziano, V., Kycia, H., Studier, F.W., and Swaminathan, S., in 2003 in a paper entitled "Structure of a yeast hypothetical protein selected by a structural genomics approach." (abstract).

This crystal structure was determined using X-ray diffraction at a resolution of 2.1 Å and deposited in 1999.

The experimental data on which the structure is based was also deposited.

The PDB entry contains the structure of YEAST HYPOTHETICAL PROTEIN. This molecule has the UniProt identifier P38197 (YBD6_YEAST)search. The sample contained 257 residues which is 100% of the natural sequence. Out of 257 residues 230 were observed and are deposited in the PDB.

It also contains one or more heterogenic compounds (e.g., ligands, co-factors, ions, modified amino acids, etc.); see here for a complete list.

The molecule is most likely monomeric.

The following tables show cross-reference information to other databases (to obtain a list of all PDB entries sharing the same property or classification, click on the magnifying glass icon):


Chain Name UniProt Name of source organism % of UniProt sequence present in the sample Residues in the sample molecules % of residues observed
A YEAST HYPOTHETICAL PROTEIN P38197 (1-257) (YBD6_YEAST)search Saccharomyces cerevisiae S288csearch 100% 257 89%


This entry contains 1 unique UniProt protein:

UniProt accession Name Organism PDB
P38197 (1 - 257) YEAST HYPOTHETICAL PROTEIN Saccharomyces cerevisiae

Chain Structural classification (SCOP) Structural classification (CATH) Sequence family (Pfam)
A (P38197) "Hypothetical" protein ybl036csearch Alanine racemasesearch PF01168: Alanine racemase, N-terminal domainsearch

Chain ID Biological process (GO) Molecular function (GO) Cellular component (GO)
A (P38197) biological_processsearch pyridoxal phosphate bindingsearch cellular_componentsearch

Chain InterPro annotation
A Alanine racemase, N-terminalsearch Uncharacterised protein family UPF0001search PLP-binding barrelsearch