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PDBe Entry: 1a3r view

FAB FRAGMENT (ANTIBODY 8F5) COMPLEXED WITH PEPTIDE FROM HUMAN RHINOVIRUS (SEROTYPE 2) VIRAL CAPSID PROTEIN VP2 (RESIDUES 156-170)
Summary
Header Viral protein/Immune systemsearch
Method X-RAY DIFFRACTION
Experiment Resolution: 2.1 Å, R-factor: 17.1%, Spacegroup: P 21 21 21
Released 29/04/1998, deposition: 23/01/1998, last revision: 24/02/2009
Authors Tormo, J.search; Blaas, D.search; Fita, I.search
Primary citation Crystal structure of a human rhinovirus neutralizing antibody complexed with a peptide derived from viral capsid protein VP2.
EMBO J.search vol:13, pag:2247-2256 (1994) [PubMed ID 8194515 ]search
Keywords IMMUNOGLOBULINsearch, ANTIBODYsearch, RHINOVIRUSsearch, NEUTRALIZATIONsearch, CONTINUOUS EPITOPEsearch, COMPLEX (IMMUNOGLOBULIN/VIRAL PEPTIDE)search, Viral protein/Immune system COMPLEXsearch
EC 2.7.7.48 ExPASy BRENDA search 3.4.22.28 ExPASy BRENDA search 3.4.22.29 ExPASy BRENDA search 3.6.1.15 ExPASy BRENDA search (P)
Organism Mus musculus(house mouse) 10090search(L H),Human rhinovirus 2 12130search(P)
UniProt ENSMUSG00000076577 protein Q52L64search (L)
Igh-1a protein Q505N9search (H)
Genome polyprotein [Contains: Protein VP0 (VP4-VP2); Protein VP4 (Virion protein 4) (P1A); Protein VP2 (Virion protein 2) (P1B); Protein VP3 (Virion protein 3) (P1C); Protein VP1 (Virion protein 1) (P1D); Picornain 2A (EC 3.4.22.29) (Protein 2A) (P2A); Protein 2B (P2B); Protein 2C (EC 3.6.1.15) (P2C); Protein 3A (P3A); Protein 3B (P3B) (VPg); Picornain 3C (EC 3.4.22.28) (Protease 3C) (P3C); RNA-directed RNA polymerase 3D-POL (EC 2.7.7.48) (P3D-POL)] P04936search (P)
Solvent H, L, P
Polymers
Id Name Type UniProt Residues Observed
L IGG2A 8F5 FAB (LIGHT CHAIN) Protein Q52L64 (Q52L64_MOUSE)search
220 100%
H IGG2A 8F5 FAB (HEAVY CHAIN) Protein Q505N9 (Q505N9_MOUSE)search
218 97%
P HUMAN RHINOVIRUS CAPSID PROTEIN VP2 Protein P04936 (POLG_HRV2)search
16 100%
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