› 1ybm

X-ray diffraction
2.1Å resolution

X-ray structure of selenomethionyl gene product from Arabidopsis thaliana at5g02240 in space group P21212

Released:
DOI: 10.2210/pdb1ybm/pdb
PDB entry 1ybm coloured by chain, front view.
PDB entry 1ybm coloured by chain, side view.
PDB entry 1ybm coloured by chain, top view.
Source organism: Arabidopsis thaliana
Entry authors: Wesenberg GE, Smith DW, Phillips Jr GN, Bitto E, Bingman CA, Allard STM, Center for Eukaryotic Structural Genomics (CESG)

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-188226 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
unknown protein At5g02240 Chains: A, B
Molecule details ›
Chains: A, B
Length: 253 amino acids
Theoretical weight: 27.09 KDa
Source organism: Arabidopsis thaliana
Expression system: Escherichia coli
UniProt:
  • Canonical: Q94EG6 (Residues: 2-253; Coverage: 100%)
Gene names: At5g02240, T7H20_290
Sequence domains: NAD(P)H-binding
Structure domains: NAD(P)-binding Rossmann-like Domain

Ligands and Environments

1 bound ligand:
Ligand NAP 2 x NAP
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 14-ID-B
Spacegroup: P21212
Unit cell:
a: 74.634Å b: 77.286Å c: 92.864Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.193 0.189 0.262
Expression system: Escherichia coli

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