› 1vxc

X-ray diffraction
1.7Å resolution

NATIVE SPERM WHALE MYOGLOBIN

Released:
DOI: 10.2210/pdb1vxc/pdb
PDB entry 1vxc coloured by chain, front view.
PDB entry 1vxc coloured by chain, side view.
PDB entry 1vxc coloured by chain, top view.
Source organism: Physeter catodon
Primary publication:
Crystal structures of CO-, deoxy- and met-myoglobins at various pH values.
Yang F, Phillips GN
J Mol Biol 256 762-74 (1996)
PMID: 8642596

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-135409 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Myoglobin Chain: A
Molecule details ›
Chain: A
Length: 153 amino acids
Theoretical weight: 17.23 KDa
Source organism: Physeter catodon
UniProt:
  • Canonical: P02185 (Residues: 2-154; Coverage: 99%)
Gene name: MB
Sequence domains: Globin
Structure domains: Globins

Ligands and Environments

3 bound ligands:
Ligand SO4 1 x SO4
Ligand HEM 1 x HEM
Ligand CMO 1 x CMO
No modified residues

Experiments and Validation Details

Entry percentile scores
Spacegroup: P21
Unit cell:
a: 64.523Å b: 30.898Å c: 34.824Å
α: 90° β: 105.86° γ: 90°
R-values:
R R work R free
0.155 0.155 not available

Quick links

Citations

11 review citations

How useful is ion mobility mass spectrometry for structural biology? The relationship between protein crystal structures and their collision cross sections in the gas phase.
Jurneczko et al. (2011)
10 more

4 mentions without citation

The pH dependence of heme pocket hydration and ligand rebinding kinetics in photodissociated carbonmonoxymyoglobin.
Esquerra et al. (2008)
3 more