› 1qsj

X-ray diffraction
1.9Å resolution

N-TERMINALLY TRUNCATED C3DG FRAGMENT

Released:
DOI: 10.2210/pdb1qsj/pdb
PDB entry 1qsj coloured by chain, front view.
PDB entry 1qsj coloured by chain, side view.
PDB entry 1qsj coloured by chain, top view.
Source organism: Rattus norvegicus
Primary publication:
Structure at 1.44 A resolution of an N-terminally truncated form of the rat serum complement C3d fragment.
Zanotti G, Bassetto A, Battistutta R, Folli C, Arcidiaco P, Stoppini M, Berni R
Biochim Biophys Acta 1478 232-8 (2000)
PMID: 10825534

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-133858 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Complement C3d fragment Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 277 amino acids
Theoretical weight: 31.15 KDa
Source organism: Rattus norvegicus
UniProt:
  • Canonical: P01026 (Residues: 1010-1286; Coverage: 17%)
Gene name: C3
Sequence domains: A-macroglobulin TED domain
Structure domains: Glycosyltransferase

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: ELETTRA BEAMLINE 5.2R
Spacegroup: P212121
Unit cell:
a: 99.62Å b: 99.93Å c: 114.88Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.212 0.212 0.253

Quick links

Citations

3 review citations

Structural insights into the central complement component C3.
Janssen et al. (2007)
2 more

1 mention without citation

Structural model of the Rev regulatory protein from equine infectious anemia virus.
Ihm et al. (2009)