1hez

X-ray diffraction
2.7Å resolution

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero pentamer (preferred)
PDBe Complex ID:
PDB-CPX-134646 (preferred)
Entry contents:
3 distinct polypeptide molecules
Macromolecules (3 distinct):
Immunoglobulin kappa constant Chains: A, C
Molecule details ›
Chains: A, C
Length: 214 amino acids
Theoretical weight: 23.37 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P01834 (Residues: 1-107; Coverage: 100%)
Gene name: IGKC
Sequence domains: Immunoglobulin C1-set domain
Structure domains: Immunoglobulins
Immunoglobulin heavy constant mu Chains: B, D
Molecule details ›
Chains: B, D
Length: 224 amino acids
Theoretical weight: 24.29 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P01871 (Residues: 1-104; Coverage: 22%)
Gene name: IGHM
Sequence domains: Immunoglobulin C1-set domain
Structure domains: Immunoglobulins
Gram-positive cocci surface proteins LPxTG domain-containing protein Chain: E
Molecule details ›
Chain: E
Length: 61 amino acids
Theoretical weight: 6.75 KDa
Source organism: Finegoldia magna
UniProt:
  • Canonical: Q51918 (Residues: 476-536; Coverage: 6%)
Sequence domains: Protein L b1 domain
Structure domains: Ubiquitin-like (UB roll)

Ligands and Environments

1 bound ligand:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: LURE BEAMLINE DW32
Spacegroup: P212121
Unit cell:
a: 55.185Å b: 87.335Å c: 210.538Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.215 0.215 0.278