› 1gt3

X-ray diffraction
1.8Å resolution

Complex of Bovine Odorant Binding Protein with dihydromyrcenol

Released:
DOI: 10.2210/pdb1gt3/pdb
PDB entry 1gt3 coloured by chain, front view.
PDB entry 1gt3 coloured by chain, side view.
PDB entry 1gt3 coloured by chain, top view.
Source organism: Bos taurus
Primary publication:
Crystal structures of bovine odorant-binding protein in complex with odorant molecules.
Vincent F, Ramoni R, Spinelli S, Grolli S, Tegoni M, Cambillau C
Eur J Biochem 271 3832-42 (2004)
PMID: 15373829

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-139586 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Odorant-binding protein Chains: A, B
Molecule details ›
Chains: A, B
Length: 159 amino acids
Theoretical weight: 18.53 KDa
Source organism: Bos taurus
UniProt:
  • Canonical: P07435 (Residues: 1-159; Coverage: 100%)
Sequence domains: Lipocalin / cytosolic fatty-acid binding protein family
Structure domains: Lipocalin

Ligands and Environments

2 bound ligands:
Ligand DHM 2 x DHM
Ligand 3OM 2 x 3OM
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: RIGAKU RU200
Spacegroup: P21
Unit cell:
a: 55.589Å b: 65.206Å c: 42.153Å
α: 90° β: 98.32° γ: 90°
R-values:
R R work R free
0.201 0.201 0.24

Quick links

Citations

1 review citation

Lipocalins - a family portrait.
Grzyb et al. (2006)
30 other articles

1 mention without citation

Essential Oils as Antiviral Agents. Potential of Essential Oils to Treat SARS-CoV-2 Infection: An In-Silico Investigation.
Silva et al. (2020)