1dxm

X-ray diffraction
2.6Å resolution

Function and Biology Details

Structure analysis Details

Assembly composition:
monomeric (preferred)
PDBe Complex ID:
PDB-CPX-147589 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Glycine cleavage system H protein, mitochondrial Chains: A, B
Molecule details ›
Chains: A, B
Length: 131 amino acids
Theoretical weight: 13.96 KDa
Source organism: Pisum sativum
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: P16048 (Residues: 35-165; Coverage: 79%)
Gene names: GCDH, GDCSH
Sequence domains: Glycine cleavage H-protein
Structure domains: OB fold (Dihydrolipoamide Acetyltransferase, E2P)

Ligands and Environments

1 bound ligand:
No modified residues

Experiments and Validation Details

Entry percentile scores
Spacegroup: P3121
Unit cell:
a: 56.41Å b: 56.41Å c: 135.17Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.204 0.204 0.26
Expression system: Escherichia coli BL21(DE3)