› 115d

X-ray diffraction
1.7Å resolution

ORDERED WATER STRUCTURE IN AN A-DNA OCTAMER AT 1.7 ANGSTROMS RESOLUTION

Released:
DOI: 10.2210/pdb115d/pdb
PDB entry 115d coloured by chain, front view.
PDB entry 115d coloured by chain, side view.
PDB entry 115d coloured by chain, top view.
Source organism: Synthetic construct
Primary publication:
Ordered water structure in an A-DNA octamer at 1.7 A resolution.
Kennard O, Cruse WB, Nachman J, Prange T, Shakked Z, Rabinovich D
J Biomol Struct Dyn 3 623-47 (1986)
PMID: 3271041

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-113307 (preferred)
Entry contents:
1 distinct DNA molecule
Macromolecule:
DNA (5'-D(*GP*GP*(BRU)P*AP*(BRU)P*AP*CP*C)-3') Chains: A, B
Molecule details ›
Chains: A, B
Length: 8 nucleotides
Theoretical weight: 2.56 KDa
Source organism: Synthetic construct
Expression system: Not provided

Ligands and Environments

No bound ligands
1 modified residue:
Ligand BRU 4 x BRU

Experiments and Validation Details

Entry percentile scores
X-ray source: null, LURE
Spacegroup: P61
Unit cell:
a: 45.084Å b: 45.084Å c: 41.72Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.14 not available not available
Expression system: Not provided

Quick links

Citations

7 review citations

The effect of the base sequence on the fine structure of the DNA double helix.
Shakked et al. (1986)
6 more

3 mentions without citation

Mechanistic aspects of carotenoid biosynthesis.
Moise et al. (2014)
2 more