Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : ZM3    

Bonds between two atoms of the molecule

Total Number of Bonds: 109


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 N C14 N C sing 1.47 N N
2 N C15 N C sing 1.47 N N
3 N C16 N C sing 1.47 N N
4 C1 C2 C C doub 1.34 E N
5 C1 C28 C C sing 1.51 N N
6 O1 C5 O C doub 1.22 N N
7 C2 C3 C C sing 1.46 N N
8 O2 C11 O C sing 1.43 N N
9 O2 C12 O C sing 1.43 N N
10 C3 C4 C C doub 1.36 E N
11 O3 C13 O C sing 1.43 N N
12 C4 C5 C C sing 1.41 N N
13 O4 C12 O C sing 1.43 N N
14 O4 C18 O C sing 1.43 N N
15 C5 C6 C C sing 1.51 N N
16 O5 C24 O C doub 1.21 N N
17 C6 C7 C C sing 1.53 N N
18 C6 C8 C C sing 1.53 N N
19 O6 C24 O C sing 1.34 N N
20 O6 C25 O C sing 1.44 N N
21 O7 C29 O C sing 1.43 N N
22 O7 C30 O C sing 1.43 N N
23 C8 C9 C C sing 1.53 N N
24 O8 C31 O C sing 1.43 N N
25 O8 C32 O C sing 1.43 N N
26 C9 C10 C C sing 1.54 N N
27 C9 C11 C C sing 1.53 N N
28 O9 C33 O C sing 1.43 N N
29 O10 C35 O C sing 1.43 N N
30 C11 C20 C C sing 1.53 N N
31 O11 C30 O C sing 1.43 N N
32 O11 C36 O C sing 1.43 N N
33 C12 C13 C C sing 1.53 N N
34 C13 C14 C C sing 1.53 N N
35 C14 C17 C C sing 1.53 N N
36 C17 C18 C C sing 1.53 N N
37 C18 C19 C C sing 1.53 N N
38 C20 C21 C C sing 1.52 N N
39 C20 C22 C C sing 1.5 N N
40 C22 C23 C C doub 1.32 E N
41 C23 C24 C C sing 1.48 N N
42 C25 C26 C C sing 1.53 N N
43 C25 C28 C C sing 1.53 N N
44 C26 C27 C C sing 1.53 N N
45 C28 C29 C C sing 1.53 N N
46 C30 C31 C C sing 1.53 N N
47 C31 C33 C C sing 1.53 N N
48 C33 C35 C C sing 1.53 N N
49 C35 C36 C C sing 1.53 N N
50 C36 C37 C C sing 1.53 N N
51 C1 H1 C H sing 1.08 N N
52 C2 H2 C H sing 1.08 N N
53 C3 H3 C H sing 1.09 N N
54 O3 HO3 O H sing 0.97 N N
55 C4 H4 C H sing 1.08 N N
56 C6 H6 C H sing 1.09 N N
57 C7 H7 C H sing 1.09 N N
58 C7 H7A C H sing 1.09 N N
59 C7 H7B C H sing 1.09 N N
60 C8 H8 C H sing 1.09 N N
61 C8 H8A C H sing 1.09 N N
62 C9 H9 C H sing 1.09 N N
63 O9 HO9 O H sing 0.97 N N
64 C10 H10 C H sing 1.09 N N
65 C10 H10A C H sing 1.09 N N
66 C10 H10B C H sing 1.09 N N
67 O10 HO10 O H sing 0.97 N N
68 C11 H11 C H sing 1.1 N N
69 C12 H12 C H sing 1.09 N N
70 C13 H13 C H sing 1.09 N N
71 C14 H14 C H sing 1.09 N N
72 C15 H15 C H sing 1.09 N N
73 C15 H15A C H sing 1.09 N N
74 C15 H15B C H sing 1.09 N N
75 C16 H16 C H sing 1.09 N N
76 C16 H16A C H sing 1.09 N N
77 C16 H16B C H sing 1.09 N N
78 C17 H17 C H sing 1.09 N N
79 C17 H17A C H sing 1.09 N N
80 C18 H18 C H sing 1.09 N N
81 C19 H19 C H sing 1.09 N N
82 C19 H19A C H sing 1.09 N N
83 C19 H19B C H sing 1.09 N N
84 C20 H20 C H sing 1.11 N N
85 C21 H21 C H sing 1.09 N N
86 C21 H21A C H sing 1.09 N N
87 C21 H21B C H sing 1.09 N N
88 C22 H22 C H sing 1.1 N N
89 C23 H23 C H sing 1.07 N N
90 C25 H25 C H sing 1.1 N N
91 C26 H26 C H sing 1.09 N N
92 C26 H26A C H sing 1.09 N N
93 C27 H27 C H sing 1.09 N N
94 C27 H27A C H sing 1.09 N N
95 C27 H27B C H sing 1.09 N N
96 C28 H28 C H sing 1.08 N N
97 C29 H29 C H sing 1.09 N N
98 C29 H29A C H sing 1.09 N N
99 C30 H30 C H sing 1.09 N N
100 C31 H31 C H sing 1.09 N N
101 C32 H32 C H sing 1.09 N N
102 C32 H32A C H sing 1.09 N N
103 C32 H32B C H sing 1.09 N N
104 C33 H33 C H sing 1.09 N N
105 C35 H35 C H sing 1.09 N N
106 C36 H36 C H sing 1.09 N N
107 C37 H37 C H sing 1.09 N N
108 C37 H37A C H sing 1.09 N N
109 C37 H37B C H sing 1.09 N N