Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : YI3    

Bonds between two atoms of the molecule

Total Number of Bonds: 87


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O01 C01 O C sing 1.4293478 N N
2 C02 C01 C C sing 1.5256792 N N
3 C02 C03 C C sing 1.5298117 N N
4 C01 C10 C C sing 1.5329192 N N
5 C03 O02 C O sing 1.4280256 N N
6 C03 C04 C C sing 1.5327733 N N
7 C10 C05 C C sing 1.5128067 N N
8 C04 C05 C C sing 1.5116289 N N
9 C05 C06 C C doub 1.3282579 N N
10 C06 C07 C C sing 1.471699 N N
11 C07 C08 C C doub 1.3277247 E N
12 C15 C14 C C sing 1.5308318 N N
13 C15 C16 C C sing 1.5551325 N N
14 C08 C14 C C sing 1.5003979 N N
15 C08 C09 C C sing 1.5223367 N N
16 C18 C13 C C sing 1.5307806 N N
17 C14 C13 C C sing 1.5567665 N N
18 C16 C17 C C sing 1.5513642 N N
19 C09 C28 C C sing 1.5301065 N N
20 C09 C11 C C sing 1.5273314 N N
21 C29 C30 C C sing 1.5301065 N N
22 C29 C28 C C sing 1.5301411 N N
23 C30 C31 C C sing 1.5296631 N N
24 C13 C17 C C sing 1.5204552 N N
25 C13 C12 C C sing 1.5107098 N N
26 C27 C25 C C sing 1.5297543 N N
27 C24 C25 C C sing 1.5300212 N N
28 C24 C23 C C sing 1.5304055 N N
29 C11 C12 C C sing 1.5373783 N N
30 C17 C20 C C sing 1.5296226 N N
31 C22 C23 C C sing 1.5296654 N N
32 C22 C20 C C sing 1.5297898 N N
33 C25 C26 C C sing 1.5295882 N N
34 C25 O03 C O sing 1.429842 N N
35 C20 C21 C C sing 1.529748 N N
36 O03 H1 O H sing 0.9663985 N N
37 C26 H2 C H sing 1.0900555 N N
38 C26 H3 C H sing 1.0895948 N N
39 C26 H4 C H sing 1.0900614 N N
40 C27 H5 C H sing 1.0907722 N N
41 C27 H6 C H sing 1.0896885 N N
42 C27 H7 C H sing 1.0895948 N N
43 C24 H8 C H sing 1.0897399 N N
44 C24 H9 C H sing 1.0898156 N N
45 C23 H10 C H sing 1.0897399 N N
46 C23 H11 C H sing 1.0905123 N N
47 C22 H12 C H sing 1.0897399 N N
48 C22 H13 C H sing 1.0898156 N N
49 C20 H14 C H sing 1.0909619 N N
50 C21 H15 C H sing 1.0905054 N N
51 C21 H16 C H sing 1.0901903 N N
52 C21 H17 C H sing 1.0896375 N N
53 C17 H18 C H sing 1.0902702 N N
54 C16 H19 C H sing 1.090327 N N
55 C16 H20 C H sing 1.0889931 N N
56 C15 H21 C H sing 1.0894958 N N
57 C15 H22 C H sing 1.0900187 N N
58 C14 H23 C H sing 1.0893562 N N
59 C18 H24 C H sing 1.0904301 N N
60 C18 H25 C H sing 1.0891662 N N
61 C18 H26 C H sing 1.0904793 N N
62 C12 H27 C H sing 1.0894645 N N
63 C12 H28 C H sing 1.0899986 N N
64 C11 H29 C H sing 1.0900661 N N
65 C11 H30 C H sing 1.0899825 N N
66 C09 H31 C H sing 1.0899509 N N
67 C28 H32 C H sing 1.0898596 N N
68 C28 H33 C H sing 1.0902816 N N
69 C29 H34 C H sing 1.0898596 N N
70 C29 H35 C H sing 1.0897161 N N
71 C30 H36 C H sing 1.0904408 N N
72 C30 H37 C H sing 1.0902816 N N
73 C31 H38 C H sing 1.0898192 N N
74 C31 H39 C H sing 1.0904408 N N
75 C31 H40 C H sing 1.0902816 N N
76 C07 H41 C H sing 1.0800134 N N
77 C06 H42 C H sing 1.0800527 N N
78 C10 H43 C H sing 1.0896509 N N
79 C10 H44 C H sing 1.0895824 N N
80 C04 H45 C H sing 1.0900596 N N
81 C04 H46 C H sing 1.0895889 N N
82 C03 H47 C H sing 1.0895164 N N
83 O02 H48 O H sing 0.96719956 N N
84 C02 H49 C H sing 1.0895807 N N
85 C02 H50 C H sing 1.0908208 N N
86 C01 H51 C H sing 1.0900211 N N
87 O01 H52 O H sing 0.9668842 N N