Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : YI2    

Bonds between two atoms of the molecule

Total Number of Bonds: 79


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O04 C31 O C sing 1.43 N N
2 C31 C30 C C sing 1.51 N N
3 C30 C02 C C doub 1.31 E N
4 O01 C01 O C sing 1.43 N N
5 C02 C01 C C sing 1.51 N N
6 C02 C03 C C sing 1.51 N N
7 C01 C10 C C sing 1.53 N N
8 C03 O02 C O sing 1.43 N N
9 C03 C04 C C sing 1.53 N N
10 C10 C05 C C sing 1.51 N N
11 C04 C05 C C sing 1.51 N N
12 C05 C06 C C doub 1.33 Z N
13 C06 C07 C C sing 1.47 N N
14 C07 C08 C C doub 1.33 E N
15 C15 C14 C C sing 1.53 N N
16 C15 C16 C C sing 1.53 N N
17 C08 C14 C C sing 1.5 N N
18 C08 C09 C C sing 1.51 N N
19 C18 C13 C C sing 1.53 N N
20 C14 C13 C C sing 1.55 N N
21 C09 C11 C C sing 1.53 N N
22 C16 C17 C C doub 1.33 N N
23 C26 C28 C C sing 1.53 N N
24 C26 C24 C C sing 1.53 N N
25 C13 C17 C C sing 1.48 N N
26 C13 C12 C C sing 1.5 N N
27 C11 C12 C C sing 1.54 N N
28 C17 C20 C C sing 1.51 N N
29 C23 C24 C C sing 1.53 N N
30 C23 S22 C S sing 1.81 N N
31 C24 O03 C O sing 1.43 N N
32 C24 C27 C C sing 1.53 N N
33 C29 C27 C C sing 1.53 N N
34 C20 S22 C S sing 1.81 N N
35 C20 C21 C C sing 1.53 N N
36 C12 H1 C H sing 1.09 N N
37 C12 H2 C H sing 1.09 N N
38 C14 H3 C H sing 1.09 N N
39 C15 H4 C H sing 1.09 N N
40 C15 H5 C H sing 1.09 N N
41 C16 H6 C H sing 1.08 N N
42 C21 H8 C H sing 1.09 N N
43 C21 H9 C H sing 1.09 N N
44 C21 H10 C H sing 1.09 N N
45 C23 H11 C H sing 1.09 N N
46 C23 H12 C H sing 1.09 N N
47 C29 H13 C H sing 1.09 N N
48 C29 H14 C H sing 1.09 N N
49 C29 H15 C H sing 1.09 N N
50 C27 H16 C H sing 1.09 N N
51 C27 H17 C H sing 1.09 N N
52 C26 H18 C H sing 1.09 N N
53 C26 H19 C H sing 1.09 N N
54 C28 H20 C H sing 1.09 N N
55 C28 H21 C H sing 1.09 N N
56 C28 H22 C H sing 1.09 N N
57 O03 H23 O H sing 0.97 N N
58 C20 H24 C H sing 1.09 N N
59 C18 H26 C H sing 1.09 N N
60 C18 H27 C H sing 1.09 N N
61 C18 H28 C H sing 1.09 N N
62 C11 H29 C H sing 1.09 N N
63 C11 H30 C H sing 1.09 N N
64 C09 H31 C H sing 1.09 N N
65 C09 H32 C H sing 1.09 N N
66 C07 H33 C H sing 1.08 N N
67 C06 H34 C H sing 1.08 N N
68 C10 H35 C H sing 1.09 N N
69 C10 H36 C H sing 1.09 N N
70 C01 H37 C H sing 1.09 N N
71 O01 H38 O H sing 0.97 N N
72 C04 H39 C H sing 1.09 N N
73 C04 H40 C H sing 1.09 N N
74 C03 H41 C H sing 1.09 N N
75 O02 H42 O H sing 0.97 N N
76 C30 H43 C H sing 1.08 N N
77 C31 H44 C H sing 1.09 N N
78 C31 H45 C H sing 1.09 N N
79 O04 H46 O H sing 0.97 N N