Chemical Components in the PDB

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  • 0MK (Stereoisomer)
  • ARA (Stereoisomer)
  • ARB (Stereoisomer)
  • HSY (Stereoisomer)
  • LDY (Stereoisomer)
  • LXC (Stereoisomer)
  • RIP (Stereoisomer)
  • XYS (Stereoisomer)

PDBeChem : Chemical Bonds

 Molecule : XYP    

Bonds between two atoms of the molecule

Total Number of Bonds: 20


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O4A C1B O C sing 1.4283309 N N
2 O4A HO4A O H sing 0.9658923 N N
3 C1B C2B C C sing 1.5298506 N N
4 C1B O5B C O sing 1.4264084 N N
5 C1B H1B C H sing 1.089219 N N
6 C2B C3B C C sing 1.5318521 N N
7 C2B O2B C O sing 1.4281439 N N
8 C2B H2B C H sing 1.0904834 N N
9 C3B C4B C C sing 1.532572 N N
10 C3B O3B C O sing 1.4283007 N N
11 C3B H3B C H sing 1.0905796 N N
12 C4B C5B C C sing 1.5302408 N N
13 C4B O4B C O sing 1.4287341 N N
14 C4B H4B C H sing 1.0898169 N N
15 C5B O5B C O sing 1.424795 N N
16 C5B H5B1 C H sing 1.0896935 N N
17 C5B H5B2 C H sing 1.0896578 N N
18 O2B HO2B O H sing 0.96763885 N N
19 O3B HO3B O H sing 0.96659094 N N
20 O4B HO4B O H sing 0.9663084 N N