Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : VVX    

Bonds between two atoms of the molecule

Total Number of Bonds: 66


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C2 C1 C C sing 1.53 N N
2 C1 C C C sing 1.53 N N
3 C1 N C N sing 1.47 N N
4 N C25 N C sing 1.47 N N
5 N C3 N C sing 1.47 N N
6 C25 C24 C C sing 1.53 N N
7 C24 N1 C N sing 1.47 N N
8 N1 C4 N C sing 1.47 N N
9 N1 C5 N C sing 1.47 N N
10 C4 C3 C C sing 1.53 N N
11 C5 C6 C C sing 1.51 N N
12 C6 O C O sing 1.35 N Y
13 C6 C7 C C doub 1.35 N Y
14 O C8 O C sing 1.34 N Y
15 C8 N2 C N doub 1.31 N Y
16 C8 C9 C C sing 1.48 N N
17 N2 C7 N C sing 1.34 N Y
18 C9 C15 C C sing 1.41 N Y
19 C9 C10 C C doub 1.39 N Y
20 C15 C14 C C sing 1.41 N Y
21 C15 C13 C C doub 1.41 N Y
22 C14 N4 C N doub 1.3 N Y
23 N4 N3 N N sing 1.4 N Y
24 N3 C13 N C sing 1.37 N Y
25 C13 C12 C C sing 1.39 N Y
26 C12 C11 C C doub 1.39 N Y
27 C11 C10 C C sing 1.4 N Y
28 C11 C16 C C sing 1.48 N N
29 C16 C23 C C sing 1.41 N Y
30 C16 C17 C C doub 1.39 N Y
31 C23 C22 C C sing 1.46 N Y
32 C23 C20 C C doub 1.41 N Y
33 C22 C21 C C doub 1.34 N Y
34 C21 N5 C N sing 1.37 N Y
35 N5 C20 N C sing 1.38 N Y
36 C20 C19 C C sing 1.39 N Y
37 C19 C18 C C doub 1.38 N Y
38 C18 C17 C C sing 1.39 N Y
39 C2 H21C C H sing 1.09 N N
40 C2 H22C C H sing 1.09 N N
41 C2 H23C C H sing 1.09 N N
42 C1 H1 C H sing 1.09 N N
43 C HC1 C H sing 1.09 N N
44 C HC2 C H sing 1.09 N N
45 C HC3 C H sing 1.09 N N
46 C25 H251 C H sing 1.09 N N
47 C25 H252 C H sing 1.09 N N
48 C3 H31C C H sing 1.09 N N
49 C3 H32C C H sing 1.09 N N
50 C24 H241 C H sing 1.09 N N
51 C24 H242 C H sing 1.09 N N
52 C4 H41C C H sing 1.09 N N
53 C4 H42C C H sing 1.09 N N
54 C5 H51C C H sing 1.09 N N
55 C5 H52C C H sing 1.09 N N
56 C7 H7 C H sing 1.08 N N
57 C10 H10 C H sing 1.08 N N
58 C14 H14 C H sing 1.08 N N
59 N3 H3 N H sing 0.97 N N
60 C12 H12 C H sing 1.08 N N
61 C17 H17 C H sing 1.08 N N
62 C22 H22 C H sing 1.08 N N
63 C21 H21 C H sing 1.08 N N
64 N5 H5 N H sing 0.97 N N
65 C19 H19 C H sing 1.08 N N
66 C18 H18 C H sing 1.08 N N