Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : SHH    

Bonds between two atoms of the molecule

Total Number of Bonds: 39


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O1 N1 O N sing 1.42 N N
2 O1 HO1 O H sing 0.97 N N
3 O2 C1 O C doub 1.21 N N
4 N1 C1 N C sing 1.35 N N
5 N1 HN1 N H sing 0.97 N N
6 C1 C2 C C sing 1.51 N N
7 C2 C3 C C sing 1.53 N N
8 C2 H21 C H sing 1.09 N N
9 C2 H22 C H sing 1.09 N N
10 C3 C4 C C sing 1.53 N N
11 C3 H31 C H sing 1.09 N N
12 C3 H32 C H sing 1.09 N N
13 C4 C5 C C sing 1.53 N N
14 C4 H41 C H sing 1.09 N N
15 C4 H42 C H sing 1.09 N N
16 C5 C6 C C sing 1.53 N N
17 C5 H51 C H sing 1.09 N N
18 C5 H52 C H sing 1.09 N N
19 C6 C7 C C sing 1.53 N N
20 C6 H61 C H sing 1.09 N N
21 C6 H62 C H sing 1.09 N N
22 C7 C8 C C sing 1.51 N N
23 C7 H71 C H sing 1.09 N N
24 C7 H72 C H sing 1.09 N N
25 C8 O3 C O doub 1.21 N N
26 C8 N2 C N sing 1.35 N N
27 N2 C9 N C sing 1.4 N N
28 N2 HN2 N H sing 0.97 N N
29 C9 C10 C C doub 1.39 N Y
30 C9 C14 C C sing 1.39 N Y
31 C10 C11 C C sing 1.38 N Y
32 C10 H101 C H sing 1.08 N N
33 C11 C12 C C doub 1.38 N Y
34 C11 H111 C H sing 1.08 N N
35 C12 C13 C C sing 1.38 N Y
36 C12 H121 C H sing 1.08 N N
37 C13 C14 C C doub 1.38 N Y
38 C13 H131 C H sing 1.08 N N
39 C14 H141 C H sing 1.08 N N