Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : RI9    

Bonds between two atoms of the molecule

Total Number of Bonds: 50


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O1 C2 O C doub 1.22 N N
2 C2 N11 C N sing 1.35 N N
3 C2 N3 C N sing 1.35 N N
4 N3 C4 N C sing 1.39 N N
5 N3 HN3 N H sing 0.97 N N
6 C4 N5 C N doub 1.33 N Y
7 C4 C9 C C sing 1.39 N Y
8 N5 C6 N C sing 1.32 N Y
9 C6 N7 C N doub 1.32 N Y
10 C6 H6 C H sing 1.08 N N
11 C8 N7 C N sing 1.33 N Y
12 C9 C8 C C doub 1.39 N Y
13 C8 N10 C N sing 1.39 N N
14 C9 H9 C H sing 1.08 N N
15 C27 N10 C N sing 1.46 N N
16 N10 HN10 N H sing 0.97 N N
17 C12 N11 C N sing 1.4 N N
18 N11 HN11 N H sing 0.97 N N
19 C13 C12 C C doub 1.39 N Y
20 C12 C17 C C sing 1.39 N Y
21 F19 C13 F C sing 1.35 N N
22 C14 C13 C C sing 1.39 N Y
23 N20 C14 N C sing 1.4 N N
24 C14 C15 C C doub 1.39 N Y
25 C15 C16 C C sing 1.38 N Y
26 C15 H15 C H sing 1.08 N N
27 C16 C17 C C doub 1.38 N Y
28 C16 H16 C H sing 1.08 N N
29 C17 F18 C F sing 1.35 N N
30 S21 N20 S N sing 1.66 N N
31 N20 HN20 N H sing 0.97 N N
32 O24 S21 O S doub 1.42 N N
33 S21 C22 S C sing 1.81 N N
34 S21 O23 S O doub 1.42 N N
35 C25 C22 C C sing 1.53 N N
36 C22 H22 C H sing 1.09 N N
37 C22 H22A C H sing 1.09 N N
38 C25 C26 C C sing 1.53 N N
39 C25 H25 C H sing 1.09 N N
40 C25 H25A C H sing 1.09 N N
41 C26 H26 C H sing 1.09 N N
42 C26 H26A C H sing 1.09 N N
43 C26 H26B C H sing 1.09 N N
44 C27 C28 C C sing 1.53 N N
45 C27 H27 C H sing 1.09 N N
46 C27 H27A C H sing 1.09 N N
47 C28 O29 C O sing 1.43 N N
48 C28 H28 C H sing 1.09 N N
49 C28 H28A C H sing 1.09 N N
50 O29 HO29 O H sing 0.97 N N