Chemical Components in the PDB

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  • 0MK (Stereoisomer)
  • ARA (Stereoisomer)
  • ARB (Stereoisomer)
  • HSY (Stereoisomer)
  • LXC (Stereoisomer)
  • RIP (Stereoisomer)
  • XYP (Stereoisomer)
  • XYS (Stereoisomer)

PDBeChem : Chemical Bonds

 Molecule : LDY    

Bonds between two atoms of the molecule

Total Number of Bonds: 20


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C4 C5 C C sing 1.53 N N
2 C5 O5 C O sing 1.43 N N
3 C5 H5 C H sing 1.09 N N
4 C5 H5A C H sing 1.09 N N
5 C1 O5 C O sing 1.43 N N
6 C2 C1 C C sing 1.53 N N
7 C1 O1 C O sing 1.43 N N
8 C1 H1 C H sing 1.09 N N
9 O2 C2 O C sing 1.43 N N
10 C3 C2 C C sing 1.53 N N
11 C2 H2 C H sing 1.09 N N
12 O2 HO2 O H sing 0.97 N N
13 O3 C3 O C sing 1.43 N N
14 C3 C4 C C sing 1.53 N N
15 C3 H3 C H sing 1.09 N N
16 O3 HO3 O H sing 0.97 N N
17 C4 O4 C O sing 1.43 N N
18 C4 H4 C H sing 1.09 N N
19 O4 HO4 O H sing 0.97 N N
20 O1 HO1 O H sing 0.97 N N