Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : L29    

Bonds between two atoms of the molecule

Total Number of Bonds: 120


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C31 C30 C C doub 1.38 N Y
2 C31 C32 C C sing 1.38 N Y
3 C30 C29 C C sing 1.4 N Y
4 C32 C33 C C doub 1.4 N Y
5 C19 C18 C C sing 1.53 N N
6 O28 C27 O C doub 1.21 N N
7 C29 C27 C C sing 1.48 N N
8 C29 C34 C C doub 1.39 N Y
9 C27 N26 C N sing 1.35 N N
10 C18 C20 C C sing 1.53 N N
11 C18 C17 C C sing 1.53 N N
12 C33 C34 C C sing 1.39 N Y
13 C33 C35 C C sing 1.48 N N
14 O23 C21 O C doub 1.21 N N
15 O22 N22 O N sing 1.42 N N
16 N22 C21 N C sing 1.35 N N
17 C21 C17 C C sing 1.51 N N
18 O36 C35 O C doub 1.22 N N
19 N26 C25 N C sing 1.47 N N
20 C35 N37 C N sing 1.35 N N
21 C17 N16 C N sing 1.46 N N
22 C25 C24 C C sing 1.53 N N
23 C24 N16 C N sing 1.47 N N
24 N16 S13 N S sing 1.66 N N
25 N37 C38 N C sing 1.47 N N
26 C59 C57 C C sing 1.53 N N
27 O62 C60 O C doub 1.21 N N
28 C38 C39 C C sing 1.53 N N
29 S13 O15 S O doub 1.42 N N
30 S13 C10 S C sing 1.76 N N
31 S13 O14 S O doub 1.42 N N
32 C39 N40 C N sing 1.47 N N
33 C58 C57 C C sing 1.53 N N
34 C11 C10 C C doub 1.38 N Y
35 C11 C12 C C sing 1.38 N Y
36 C10 C9 C C sing 1.38 N Y
37 C57 C56 C C sing 1.53 N N
38 C60 C56 C C sing 1.51 N N
39 C60 N61 C N sing 1.35 N N
40 C12 C7 C C doub 1.39 N Y
41 C9 C8 C C doub 1.38 N Y
42 O61 N61 O N sing 1.42 N N
43 C56 N40 C N sing 1.47 N N
44 N40 S41 N S sing 1.66 N N
45 C7 C8 C C sing 1.39 N Y
46 C7 C1 C C sing 1.48 N N
47 C2 C1 C C doub 1.39 N Y
48 C2 C3 C C sing 1.38 N Y
49 C1 C6 C C sing 1.39 N Y
50 C3 C4 C C doub 1.38 N Y
51 C46 C47 C C doub 1.38 N Y
52 C46 C45 C C sing 1.38 N Y
53 S41 C45 S C sing 1.76 N N
54 S41 O42 S O doub 1.42 N N
55 S41 O43 S O doub 1.42 N N
56 C47 C48 C C sing 1.39 N Y
57 C51 C52 C C doub 1.38 N Y
58 C51 C50 C C sing 1.39 N Y
59 C6 C5 C C doub 1.38 N Y
60 C45 C5A C C doub 1.38 N Y
61 C4 C5 C C sing 1.38 N Y
62 C52 C53 C C sing 1.38 N Y
63 C48 C50 C C sing 1.48 N N
64 C48 C49 C C doub 1.39 N Y
65 C5A C49 C C sing 1.38 N Y
66 C50 C55 C C doub 1.39 N Y
67 C53 C54 C C doub 1.38 N Y
68 C55 C54 C C sing 1.38 N Y
69 C11 H1 C H sing 1.08 N N
70 C12 H2 C H sing 1.08 N N
71 C2 H3 C H sing 1.08 N N
72 C3 H4 C H sing 1.08 N N
73 C4 H5 C H sing 1.08 N N
74 C5 H6 C H sing 1.08 N N
75 C6 H7 C H sing 1.08 N N
76 C8 H8 C H sing 1.08 N N
77 C9 H9 C H sing 1.08 N N
78 C17 H10 C H sing 1.09 N N
79 C18 H11 C H sing 1.09 N N
80 C19 H12 C H sing 1.09 N N
81 C19 H13 C H sing 1.09 N N
82 C19 H14 C H sing 1.09 N N
83 C20 H15 C H sing 1.09 N N
84 C20 H16 C H sing 1.09 N N
85 C20 H17 C H sing 1.09 N N
86 N22 H18 N H sing 0.97 N N
87 O22 H19 O H sing 0.97 N N
88 C24 H20 C H sing 1.09 N N
89 C24 H21 C H sing 1.09 N N
90 C25 H22 C H sing 1.09 N N
91 C25 H23 C H sing 1.09 N N
92 N26 H24 N H sing 0.97 N N
93 C30 H25 C H sing 1.08 N N
94 C31 H26 C H sing 1.08 N N
95 C32 H27 C H sing 1.08 N N
96 C34 H28 C H sing 1.08 N N
97 N37 H29 N H sing 0.97 N N
98 C38 H30 C H sing 1.09 N N
99 C38 H31 C H sing 1.09 N N
100 C39 H32 C H sing 1.09 N N
101 C39 H33 C H sing 1.09 N N
102 C56 H34 C H sing 1.09 N N
103 C57 H35 C H sing 1.09 N N
104 C58 H36 C H sing 1.09 N N
105 C58 H37 C H sing 1.09 N N
106 C58 H38 C H sing 1.09 N N
107 C59 H39 C H sing 1.09 N N
108 C59 H40 C H sing 1.09 N N
109 C59 H41 C H sing 1.09 N N
110 N61 H42 N H sing 0.97 N N
111 O61 H43 O H sing 0.97 N N
112 C46 H44 C H sing 1.08 N N
113 C47 H45 C H sing 1.08 N N
114 C49 H46 C H sing 1.08 N N
115 C5A H47 C H sing 1.08 N N
116 C51 H48 C H sing 1.08 N N
117 C52 H49 C H sing 1.08 N N
118 C53 H50 C H sing 1.08 N N
119 C54 H51 C H sing 1.08 N N
120 C55 H52 C H sing 1.08 N N