Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : H59    

Bonds between two atoms of the molecule

Total Number of Bonds: 71


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C1 C2 C C doub 1.38 N Y
2 C1 C6 C C sing 1.38 N Y
3 C1 C31 C C sing 1.51 N N
4 C2 C3 C C sing 1.38 N Y
5 C3 C4 C C doub 1.38 N Y
6 C3 C33 C C sing 1.51 N N
7 C4 C5 C C sing 1.38 N Y
8 C4 F32 C F sing 1.35 N N
9 C5 C6 C C doub 1.38 N Y
10 C7 C8 C C doub 1.36 N N
11 C7 C11 C C sing 1.46 N N
12 C7 C18 C C sing 1.48 N N
13 C8 C9 C C sing 1.51 N N
14 C8 O29 C O sing 1.35 N N
15 C9 N10 C N sing 1.47 N N
16 C9 C34 C C sing 1.53 N N
17 N10 C11 N C sing 1.34 N N
18 N10 C31 N C sing 1.46 N N
19 C11 O30 C O doub 1.22 N N
20 C12 C13 C C doub 1.39 N Y
21 C12 C17 C C sing 1.38 N Y
22 C12 S20 C S sing 1.77 N N
23 C13 C14 C C sing 1.39 N Y
24 C13 N19 C N sing 1.39 N N
25 C14 C15 C C doub 1.38 N Y
26 C15 C16 C C sing 1.39 N Y
27 C16 C17 C C doub 1.39 N Y
28 C16 N24 C N sing 1.4 N N
29 C18 N19 C N sing 1.38 N N
30 C18 C21 C C doub 1.33 N N
31 S20 C21 S C sing 1.77 N N
32 S20 O22 S O doub 1.42 N N
33 S20 O23 S O doub 1.42 N N
34 N24 S25 N S sing 1.66 N N
35 S25 C26 S C sing 1.81 N N
36 S25 O27 S O doub 1.42 N N
37 S25 O28 S O doub 1.42 N N
38 C34 C35 C C sing 1.53 N N
39 C34 C37 C C sing 1.53 N N
40 C34 C38 C C sing 1.53 N N
41 C35 C36 C C sing 1.53 N N
42 C2 H2 C H sing 1.08 N N
43 C5 H5 C H sing 1.08 N N
44 C6 H6 C H sing 1.08 N N
45 C9 H9 C H sing 1.09 N N
46 C14 H14 C H sing 1.08 N N
47 C15 H15 C H sing 1.08 N N
48 C17 H17 C H sing 1.08 N N
49 N19 HN19 N H sing 0.97 N N
50 C21 H21 C H sing 1.08 N N
51 N24 HN24 N H sing 0.97 N N
52 C26 H26 C H sing 1.09 N N
53 C26 H26A C H sing 1.09 N N
54 C26 H26B C H sing 1.09 N N
55 O29 HO29 O H sing 0.97 N N
56 C31 H31 C H sing 1.09 N N
57 C31 H31A C H sing 1.09 N N
58 C33 H33 C H sing 1.09 N N
59 C33 H33A C H sing 1.09 N N
60 C33 H33B C H sing 1.09 N N
61 C35 H35 C H sing 1.09 N N
62 C35 H35A C H sing 1.09 N N
63 C36 H36 C H sing 1.09 N N
64 C36 H36A C H sing 1.09 N N
65 C36 H36B C H sing 1.09 N N
66 C37 H37 C H sing 1.09 N N
67 C37 H37A C H sing 1.09 N N
68 C37 H37B C H sing 1.09 N N
69 C38 H38 C H sing 1.09 N N
70 C38 H38A C H sing 1.09 N N
71 C38 H38B C H sing 1.09 N N