Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : EP9    

Bonds between two atoms of the molecule

Total Number of Bonds: 82


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C15 O5 C O doub 1.22 N N
2 O4 C15 O C sing 1.35 N N
3 O4 C16 O C sing 1.45 N N
4 C16 C17 C C sing 1.51 N N
5 C16 H16 C H sing 1.09 N N
6 C16 H17 C H sing 1.09 N N
7 C17 C18 C C sing 1.38 N Y
8 C18 C19 C C doub 1.38 N Y
9 C18 H18 C H sing 1.08 N N
10 C19 H19 C H sing 1.08 N N
11 C20 C19 C C sing 1.38 N Y
12 C20 H20 C H sing 1.08 N N
13 C21 C20 C C doub 1.38 N Y
14 C21 H21 C H sing 1.08 N N
15 C22 C17 C C doub 1.38 N Y
16 C22 C21 C C sing 1.38 N Y
17 C22 H22 C H sing 1.08 N N
18 N3 C15 N C sing 1.35 N N
19 N3 H15 N H sing 0.97 N N
20 C14 N3 C N sing 1.47 N N
21 C14 H14 C H sing 1.09 N N
22 C13 C14 C C sing 1.51 N N
23 O6 C13 O C doub 1.21 N N
24 C23 C14 C C sing 1.53 N N
25 C23 C24 C C sing 1.53 N N
26 C23 H23 C H sing 1.09 N N
27 C23 H24 C H sing 1.09 N N
28 C24 H25 C H sing 1.09 N N
29 C25 C24 C C sing 1.53 N N
30 C25 H26 C H sing 1.09 N N
31 C25 H27 C H sing 1.09 N N
32 C25 H28 C H sing 1.09 N N
33 C26 C24 C C sing 1.53 N N
34 C26 H29 C H sing 1.09 N N
35 C26 H30 C H sing 1.09 N N
36 C26 H31 C H sing 1.09 N N
37 N2 C13 N C sing 1.35 N N
38 N2 H13 N H sing 0.97 N N
39 C12 C27 C C sing 1.53 N N
40 C12 N2 C N sing 1.46 N N
41 C12 H12 C H sing 1.09 N N
42 C11 C12 C C sing 1.51 N N
43 O7 C11 O C doub 1.21 N N
44 C27 H32 C H sing 1.09 N N
45 C27 H33 C H sing 1.09 N N
46 C28 C27 C C sing 1.53 N N
47 C28 C30 C C sing 1.53 N N
48 C28 H34 C H sing 1.09 N N
49 C29 C28 C C sing 1.53 N N
50 C29 H35 C H sing 1.09 N N
51 C29 H36 C H sing 1.09 N N
52 C29 H37 C H sing 1.09 N N
53 C30 H38 C H sing 1.09 N N
54 C30 H39 C H sing 1.09 N N
55 C30 H40 C H sing 1.09 N N
56 C1 C3 C C sing 1.53 N N
57 C1 H43 C H sing 1.09 N N
58 O1 C1 O C sing 1.43 N N
59 O1 H41 O H sing 0.97 N N
60 O2 C2 O C doub 1.21 N N
61 C2 C1 C C sing 1.51 N N
62 C3 N1 C N sing 1.46 N N
63 C3 H3 C H sing 1.09 N N
64 C4 C3 C C sing 1.53 N N
65 C4 C5 C C sing 1.51 N N
66 C4 H4 C H sing 1.09 N N
67 C4 H5 C H sing 1.09 N N
68 C5 C10 C C sing 1.38 N Y
69 C6 C5 C C doub 1.38 N Y
70 C6 C7 C C sing 1.38 N Y
71 C6 H6 C H sing 1.08 N N
72 C7 C8 C C doub 1.39 N Y
73 C7 H7 C H sing 1.08 N N
74 C8 C9 C C sing 1.39 N Y
75 C8 O3 C O sing 1.36 N N
76 O3 H8 O H sing 0.97 N N
77 C9 H9 C H sing 1.08 N N
78 C10 C9 C C doub 1.38 N Y
79 C10 H10 C H sing 1.08 N N
80 N1 C11 N C sing 1.35 N N
81 N1 H11 N H sing 0.97 N N
82 C2 H42 C H sing 1.08 N N