Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Chemical Bonds

 Molecule : 9R3    

Bonds between two atoms of the molecule

Total Number of Bonds: 72


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O3 C29 O C doub 1.22 N N
2 C26 C25 C C doub 1.36 N Y
3 C26 C27 C C sing 1.4 N Y
4 C29 O4 C O sing 1.35 N N
5 C29 C27 C C sing 1.47 N N
6 C25 C23 C C sing 1.41 N Y
7 C27 C28 C C doub 1.39 N Y
8 C23 N3 C N sing 1.34 N Y
9 C23 C24 C C doub 1.4 N Y
10 C28 C24 C C sing 1.39 N Y
11 N3 C21 N C doub 1.29 N Y
12 C24 S1 C S sing 1.76 N Y
13 C21 S1 C S sing 1.76 N Y
14 C21 N2 C N sing 1.38 N N
15 C19 C22 C C sing 1.53 N N
16 C19 C14 C C sing 1.53 N N
17 C16 N2 C N sing 1.47 N N
18 C16 C14 C C sing 1.53 N N
19 N2 C18 N C sing 1.47 N N
20 C22 C20 C C sing 1.53 N N
21 C12 C11 C C doub 1.38 N Y
22 C12 C13 C C sing 1.38 N Y
23 C14 C15 C C sing 1.53 N N
24 C11 C10 C C sing 1.38 N Y
25 C20 C17 C C sing 1.53 N N
26 CL1 C13 CL C sing 1.74 N N
27 C18 C17 C C sing 1.53 N N
28 C13 C5 C C doub 1.39 N Y
29 C10 C9 C C doub 1.38 N Y
30 C17 C15 C C sing 1.53 N N
31 C15 O2 C O sing 1.43 N N
32 C5 C9 C C sing 1.39 N Y
33 C5 C3 C C sing 1.48 N N
34 O2 C6 O C sing 1.43 N N
35 C9 CL2 C CL sing 1.74 N N
36 C6 C2 C C sing 1.51 N N
37 C3 C2 C C sing 1.42 N Y
38 C3 N1 C N doub 1.31 N Y
39 C2 C1 C C doub 1.35 N Y
40 N1 O1 N O sing 1.21 N Y
41 C1 O1 C O sing 1.34 N Y
42 C1 C4 C C sing 1.51 N N
43 C4 C8 C C sing 1.53 N N
44 C4 C7 C C sing 1.53 N N
45 C8 C7 C C sing 1.53 N N
46 O4 H1 O H sing 0.97 N N
47 C26 H2 C H sing 1.08 N N
48 C25 H3 C H sing 1.08 N N
49 C28 H4 C H sing 1.08 N N
50 C16 H5 C H sing 1.09 N N
51 C16 H6 C H sing 1.09 N N
52 C18 H7 C H sing 1.09 N N
53 C18 H8 C H sing 1.09 N N
54 C17 H9 C H sing 1.09 N N
55 C20 H10 C H sing 1.09 N N
56 C20 H11 C H sing 1.09 N N
57 C22 H12 C H sing 1.09 N N
58 C22 H13 C H sing 1.09 N N
59 C19 H14 C H sing 1.09 N N
60 C19 H15 C H sing 1.09 N N
61 C14 H16 C H sing 1.09 N N
62 C15 H17 C H sing 1.09 N N
63 C6 H18 C H sing 1.09 N N
64 C6 H19 C H sing 1.09 N N
65 C4 H20 C H sing 1.09 N N
66 C8 H21 C H sing 1.09 N N
67 C8 H22 C H sing 1.09 N N
68 C7 H23 C H sing 1.09 N N
69 C7 H24 C H sing 1.09 N N
70 C12 H25 C H sing 1.08 N N
71 C11 H26 C H sing 1.08 N N
72 C10 H27 C H sing 1.08 N N