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Bonds
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Molfile:
Ideal
Representative
PDB:
Ideal
Representative
Other:
mmCif
CML
Related compounds
0G
(Stereoisomer)
GAO
(Stereoisomer)
8XG
(Stereoisomer)
G
3D-Views
Ideal
Representative
PDB Links
PDB entries
PDBeChem : Chemical Bonds
Molecule :
5GP
Bonds between two atoms of the molecule
Total Number of Bonds: 40
50
10 per page
20 per page
Show all
Record
First Atom
Second Atom
First Element
Second Element
Bond Order Type
Bond Length
Bond Stereochemistry
Is Aromatic
1
P
O1P
P
O
doub
1.48
N
N
2
P
O2P
P
O
sing
1.61
N
N
3
P
O3P
P
O
sing
1.61
N
N
4
P
O5'
P
O
sing
1.61
N
N
5
O2P
HOP2
O
H
sing
0.97
N
N
6
O3P
HOP3
O
H
sing
0.97
N
N
7
O5'
C5'
O
C
sing
1.43
N
N
8
C5'
C4'
C
C
sing
1.53
N
N
9
C5'
H5'1
C
H
sing
1.09
N
N
10
C5'
H5'2
C
H
sing
1.09
N
N
11
C4'
O4'
C
O
sing
1.44
N
N
12
C4'
C3'
C
C
sing
1.54
N
N
13
C4'
H4'
C
H
sing
1.09
N
N
14
O4'
C1'
O
C
sing
1.44
N
N
15
C3'
O3'
C
O
sing
1.43
N
N
16
C3'
C2'
C
C
sing
1.55
N
N
17
C3'
H3'
C
H
sing
1.09
N
N
18
O3'
HO3'
O
H
sing
0.97
N
N
19
C2'
O2'
C
O
sing
1.43
N
N
20
C2'
C1'
C
C
sing
1.54
N
N
21
C2'
H2'
C
H
sing
1.09
N
N
22
O2'
HO2'
O
H
sing
0.97
N
N
23
C1'
N9
C
N
sing
1.47
N
N
24
C1'
H1'
C
H
sing
1.09
N
N
25
N9
C8
N
C
sing
1.36
N
Y
26
N9
C4
N
C
sing
1.37
N
Y
27
C8
N7
C
N
doub
1.3
N
Y
28
C8
H8
C
H
sing
1.08
N
N
29
N7
C5
N
C
sing
1.36
N
Y
30
C5
C6
C
C
sing
1.41
N
N
31
C5
C4
C
C
doub
1.4
N
Y
32
C6
O6
C
O
doub
1.22
N
N
33
C6
N1
C
N
sing
1.35
N
N
34
N1
C2
N
C
sing
1.36
N
N
35
N1
HN1
N
H
sing
0.97
N
N
36
C2
N2
C
N
sing
1.37
N
N
37
C2
N3
C
N
doub
1.31
N
N
38
N2
HN21
N
H
sing
0.97
N
N
39
N2
HN22
N
H
sing
0.97
N
N
40
N3
C4
N
C
sing
1.34
N
N